Unreviewed,
UniProtKB/TrEMBL Q8BRU1 (Q8BRU1_MOUSE)
Last modified
March 2, 2010.
Version 42.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Putative uncharacterized protein EMBL BAC30897.1 | ||
| Gene names |
| ||
| Organism | Mus musculus (Mouse) EMBL BAC30897.1 | ||
| Taxonomic identifier | 10090 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus |
Protein attributes
| Sequence length | 148 AA. |
| Sequence status | Fragment. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Sequence similarities | Contains 1 basic helix-loop-helix (bHLH) domain. |
Ontologies
| Gene Ontology (GO) | |
|---|---|
| Biological process | circadian rhythm Inferred from direct assay. Source: MGI positive regulation of transcription from RNA polymerase II promoterInferred from genetic interaction. Source: MGI |
| Cellular component | cytoplasm Inferred from direct assay. Source: MGI transcription factor complexInferred from direct assay. Source: MGI |
| Molecular function | transcription factor activity Inferred from direct assay. Source: MGI |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Experimental info | ||||||||
|---|---|---|---|---|---|---|---|---|
| Non-terminal residue | 148 | 1 | EMBL BAC30897.1 | |||||
Sequences
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References
| [1] | "The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. Hayashizaki Y.Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: C57BL/6J EMBL BAC30897.1. Tissue: Aorta and vein EMBL BAC30897.1. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK041303 mRNA. Translation: BAC30897.1. |
| IPI | IPI00230536. |
| UniGene | Mm.3552 Mm.392894 |
3D structure databases | |
| SMR | Q8BRU1. Positions 32-87. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q8BRU1. |
Genome annotation databases | |
| Ensembl | ENSMUST00000031148; ENSMUSP00000031148; ENSMUSG00000029238; Mus musculus. [Genome view] ENSMUST00000075159; ENSMUSP00000074656; ENSMUSG00000029238; Mus musculus. [Genome view] ENSMUST00000113497; ENSMUSP00000109125; ENSMUSG00000029238; Mus musculus. [Genome view] ENSMUST00000113499; ENSMUSP00000109127; ENSMUSG00000029238; Mus musculus. [Genome view] |
Organism-specific databases | |
| MGI | MGI:99698. Clock. |
Phylogenomic databases | |
| HOVERGEN | HBG061928. |
| InParanoid | Q8BRU1. |
Gene expression databases | |
| ArrayExpress | Q8BRU1. |
| Bgee | Q8BRU1. |
| Genevestigator | Q8BRU1. |
Family and domain databases | |
| InterPro | IPR001092. HLH_DNA-bd_dom. IPR011598. HLH_DNA_bd. IPR001067. Nuc_translocat. [Graphical view] |
| Gene3D | G3DSA:4.10.280.10. HLH_DNA_bd. 1 hit. |
| Pfam | PF00010. HLH. 1 hit. [Graphical view] |
| PRINTS | PR00785. NCTRNSLOCATR. |
| SMART | SM00353. HLH. 1 hit. [Graphical view] |
| SUPFAM | SSF47459. HLH_basic. 1 hit. |
| PROSITE | PS50888. HLH. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| SOURCE | Search... |
Entry information
| Entry name | Q8BRU1_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q8BRU1 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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