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Q8BQ73 (Q8BQ73_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL BAC34622.1
Gene names
Name:Mtmr1 MGI 1858271
OrganismMus musculus (Mouse) EMBL BAC34622.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length386 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 myotubularin phosphatase domain. SAAS SAAS017906

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAC34622.1

Sequences

Sequence LengthMass (Da)Tools
Q8BQ73 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: DFF72F6C5B013F40

FASTA38644,510
        10         20         30         40         50         60 
AAFRAKGRVP VLSWIHPESQ ATITRCSQPL VGPNDKRCKE DEKYLQTIMD ANAQSHKLTI 

        70         80         90        100        110        120 
FDARQNSVAD TNKAKGGGYE NESAYPNAEL IFLEIHNIHV MRESLRKLKE IVYPSIDESH 

       130        140        150        160        170        180 
WLSNVDGTHW LEYIRVLLAG AVRIADKIES GKTSVVIHCS DGWDRTSQLT SLAMLMLDSY 

       190        200        210        220        230        240 
YRTIKGFEAL IEKEWISFGH RFALRVGHGD DNHADADRSP IFLQFIDCVW QMTRQFPSAF 

       250        260        270        280        290        300 
EFNELFLITI LDHLYSCLFG TFLCNCEQQR IKEDVYTNTI SLWSYINSQL DEFSNPFFVN 

       310        320        330        340        350        360 
YENHVLYPVA SMSHLELWVN YYVRWNPRMR PQMPIHQNLK ELLAIKAELQ KRVEDLQREM 

       370        380 
ATRTISSSSE RGSSPTHSAT PVHTSV

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC34622.1.
Tissue: Spinal ganglion EMBL BAC34622.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC34622.1.
Tissue: Spinal ganglion EMBL BAC34622.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC34622.1.
Tissue: Spinal ganglion EMBL BAC34622.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC34622.1.
Tissue: Spinal ganglion EMBL BAC34622.1.
[5]Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K. expand/collapse author list , Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., Hayashizaki Y.
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC34622.1.
Tissue: Spinal ganglion EMBL BAC34622.1.
[6]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC34622.1.
Tissue: Spinal ganglion EMBL BAC34622.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC34622.1.
Tissue: Spinal ganglion EMBL BAC34622.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC34622.1.
Tissue: Spinal ganglion EMBL BAC34622.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK051390 mRNA. Translation: BAC34622.1.
IPIIPI00131028.
UniGeneMm.219672.

3D structure databases

HSSPHSSP built from PDB template 1LW3 based on UniProtKB Q13614.
ProteinModelPortalQ8BQ73.
ModBaseSearch...

Protein-protein interaction databases

IntActQ8BQ73. 1 interaction.
STRINGQ8BQ73.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCuc009tjy.1. mouse.

Organism-specific databases

MGIMGI:1858271. Mtmr1.

Phylogenomic databases

HOVERGENHBG000220.

Gene expression databases

ArrayExpressQ8BQ73.
BgeeQ8BQ73.
GenevestigatorQ8BQ73.

Family and domain databases

InterProIPR010569. Myotub-related.
IPR017906. Myotubularin_phosphatase_dom.
IPR000387. Tyr/Dual-sp_Pase.
IPR016130. Tyr_Pase_AS.
[Graphical view]
PfamPF06602. Myotub-related. 1 hit.
[Graphical view]
PROSITEPS51339. PPASE_MYOTUBULARIN. 1 hit.
PS00383. TYR_PHOSPHATASE_1. 1 hit.
PS50056. TYR_PHOSPHATASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ8BQ73_MOUSE
AccessionPrimary (citable) accession number: Q8BQ73
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: April 3, 2013
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info