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Q8BQ46

- Q8BQ46_MOUSE

UniProt

Q8BQ46 - Q8BQ46_MOUSE

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Protein
Submitted name: Protein Taf15
Gene
Taf15
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. nucleic acid binding Source: InterPro
  2. nucleotide binding Source: InterPro
  3. zinc ion binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Taf15Imported
Submitted name:
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factorImported
Gene namesi
Name:Taf15Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 11

Organism-specific databases

MGIiMGI:1917689. Taf15.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: Ensembl
  2. nucleus Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ8BQ46.

Interactioni

Protein-protein interaction databases

MINTiMINT-1741816.
STRINGi10090.ENSMUSP00000103770.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063105.
HOGENOMiHOG000038010.
HOVERGENiHBG005755.
InParanoidiQ8BQ46.
KOiK14651.
OMAiQKQSSYS.
OrthoDBiEOG7DZ8N7.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
4.10.1060.10. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR001876. Znf_RanBP2.
[Graphical view]
PfamiPF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
[Graphical view]
PROSITEiPS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8BQ46-1 [UniParc]FASTAAdd to Basket

« Hide

MSDSGSYSQS GGEQQSYSSY GNQGSQGYGQ TPQGYSGYGQ TTDSSYGQNY    50
GGYSGYGQNQ SGYSQSYGSY ENQKQSSYGQ QSYNNQGQQN TESSGGQGGR 100
APSYGQSDYG QQDSYDQQSG YDQHQGSYDE QSNYQQHDSY NQNQQSYHSQ 150
RENYSHHTQD DRRDVSRYGE DNRGYGGSQG GGRGRGGYDK DGRGPMTGSS 200
GGDRGGFKNF GGHRDYGPRP DADSESDNSD NNTIFVQGLG EGVSTDQVGE 250
FFKQIGIIKT NKKTGKPMIN LYTDKDTGKP KGEATVSFDD PPSAKAAIDW 300
FDGKEFHGNI IKVSFATRRP EFMRGGGSGG GRRGRGGYRG RGGFQGRGGD 350
PKNGDWVCPN PSCGNMNFAR RNSCNQCNEP RPEDSRPSGG DFRGRGYGGE 400
RGYRGRGGRG GDRGGYGGDR SGGGYGGDRS GGGYGGDRGG SYGGDRGGYG 450
GDRGGSYGGD RGGYGGDRGG YGGDRGGYGG DRGGYGGDRG GYGGDRSRGA 500
YGGDRGGSGS GSGGYGGDRS GGYGGDRSGG YGGDRGGYGG KMGGRNDYRN 550
DQRNRPY 557
Length:557
Mass (Da):58,601
Last modified:March 1, 2003 - v1
Checksum:i2BF650D055E092E1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL596122 Genomic DNA. No translation available.
AL663096 Genomic DNA. No translation available.
BC137591 mRNA. Translation: AAI37592.1.
AK051568 mRNA. Translation: BAC34676.1.
AK146331 mRNA. Translation: BAE27086.1.
RefSeqiNP_081703.1. NM_027427.2.
UniGeneiMm.181050.

Genome annotation databases

EnsembliENSMUST00000021018; ENSMUSP00000021018; ENSMUSG00000020680.
GeneIDi70439.
KEGGimmu:70439.
UCSCiuc007kpf.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL596122 Genomic DNA. No translation available.
AL663096 Genomic DNA. No translation available.
BC137591 mRNA. Translation: AAI37592.1 .
AK051568 mRNA. Translation: BAC34676.1 .
AK146331 mRNA. Translation: BAE27086.1 .
RefSeqi NP_081703.1. NM_027427.2.
UniGenei Mm.181050.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

MINTi MINT-1741816.
STRINGi 10090.ENSMUSP00000103770.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000021018 ; ENSMUSP00000021018 ; ENSMUSG00000020680 .
GeneIDi 70439.
KEGGi mmu:70439.
UCSCi uc007kpf.1. mouse.

Organism-specific databases

CTDi 8148.
MGIi MGI:1917689. Taf15.

Phylogenomic databases

GeneTreei ENSGT00530000063105.
HOGENOMi HOG000038010.
HOVERGENi HBG005755.
InParanoidi Q8BQ46.
KOi K14651.
OMAi QKQSSYS.
OrthoDBi EOG7DZ8N7.

Miscellaneous databases

ChiTaRSi TAF15. mouse.
NextBioi 331627.
PROi Q8BQ46.
SOURCEi Search...

Gene expression databases

Genevestigatori Q8BQ46.

Family and domain databases

Gene3Di 3.30.70.330. 1 hit.
4.10.1060.10. 1 hit.
InterProi IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR001876. Znf_RanBP2.
[Graphical view ]
Pfami PF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
[Graphical view ]
SMARTi SM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
[Graphical view ]
PROSITEi PS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  7. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
  9. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  10. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Spinal ganglionImported.
  11. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  12. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ8BQ46_MOUSE
AccessioniPrimary (citable) accession number: Q8BQ46
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: January 22, 2014
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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