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Q8BKG0

- Q8BKG0_MOUSE

UniProt

Q8BKG0 - Q8BKG0_MOUSE

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Protein

Transporter

Gene
Slc6a11, Gabt4
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. gamma-aminobutyric acid:sodium symporter activity Source: Ensembl
  2. neurotransmitter:sodium symporter activity Source: InterPro
  3. neurotransmitter binding Source: Ensembl

GO - Biological processi

  1. brain development Source: Ensembl
  2. response to drug Source: Ensembl
Complete GO annotation...

Keywords - Biological processi

SymportUniRule annotationSAAS annotations, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
TransporterUniRule annotation
Gene namesi
Name:Slc6a11Imported
Synonyms:Gabt4Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:95630. Slc6a11.

Subcellular locationi

GO - Cellular componenti

  1. cell projection Source: Ensembl
  2. cytoplasm Source: Ensembl
  3. integral component of plasma membrane Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiQ8BKG0.

Expressioni

Gene expression databases

BgeeiQ8BKG0.
GenevestigatoriQ8BKG0.

Structurei

3D structure databases

ProteinModelPortaliQ8BKG0.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotations

Phylogenomic databases

HOVERGENiHBG071421.
InParanoidiQ8BKG0.

Family and domain databases

InterProiIPR000175. Na/ntran_symport.
IPR002982. Na/ntran_symport_GABA_GAT3.
[Graphical view]
PANTHERiPTHR11616. PTHR11616. 1 hit.
PfamiPF00209. SNF. 1 hit.
[Graphical view]
PRINTSiPR01197. GAT3TRNSPORT.
PR00176. NANEUSMPORT.
PROSITEiPS00610. NA_NEUROTRAN_SYMP_1. 1 hit.
PS00754. NA_NEUROTRAN_SYMP_2. 1 hit.
PS50267. NA_NEUROTRAN_SYMP_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8BKG0-1 [UniParc]FASTAAdd to Basket

« Hide

VHERGHWNNK VEFVLSVAGE IIGLGNVWRF PYLCYKNGGG AFLIPYVVFF    50
ICCGIPVFFL ETALGQFTSE GGITCWRRVC PLFEGIGYAT QVIEAHLNVY 100
YIIILAWAIF YLSNCFTTEL PWATCGHEWN TEKCVEFQKL NFSNYSHVSL 150
QNATSPVMEF WERRVLAISD GIEHIGNLRW ELALCLLAAW TICYFCIWKG 200
TKSTGKVVYV TATFPYIMLL ILLIRGVTLP GASEGIKFYL YPDLSRLSDP 250
QVWVDAGTQI FFSYAICLGC LTALGSYNNY NNNCYRDCIM LCCLNSGTSF 300
VAGFAIFSVL GFMAYEQGVP IAEVAESGPG LAFIAYPKAV TMMPLSPLWA 350
TLFFMMLIFL GLDSQFVCVE SLVTAVVDMY PKVFRRGYRR ELLILALSII 400
SYFLGLVMLT EGGMYIFQLF DSYAASGMCL LFVAIFECVC IGWVYGSNRF 450
YDNIEDMIGY RPLSLIKWCW KVVTPGICAG IFIFFLVKYK PLKYNNVYTY 500
PAWGYGIGWL MALSSMLCIP LWIFIKLWKT EGTLPEKLQK LTVPSADLKM 550
RGKLGASPRT VTVNDCEAKV KGDGTISAIT EKETHF 586
Length:586
Mass (Da):66,065
Last modified:March 1, 2003 - v1
Checksum:i78EB41F1A9EB1A38
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK053261 mRNA. Translation: BAC35326.1.
UniGeneiMm.44683.
Mm.448312.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK053261 mRNA. Translation: BAC35326.1 .
UniGenei Mm.44683.
Mm.448312.

3D structure databases

ProteinModelPortali Q8BKG0.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q8BKG0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

MGIi MGI:95630. Slc6a11.

Phylogenomic databases

HOVERGENi HBG071421.
InParanoidi Q8BKG0.

Miscellaneous databases

SOURCEi Search...

Gene expression databases

Bgeei Q8BKG0.
Genevestigatori Q8BKG0.

Family and domain databases

InterProi IPR000175. Na/ntran_symport.
IPR002982. Na/ntran_symport_GABA_GAT3.
[Graphical view ]
PANTHERi PTHR11616. PTHR11616. 1 hit.
Pfami PF00209. SNF. 1 hit.
[Graphical view ]
PRINTSi PR01197. GAT3TRNSPORT.
PR00176. NANEUSMPORT.
PROSITEi PS00610. NA_NEUROTRAN_SYMP_1. 1 hit.
PS00754. NA_NEUROTRAN_SYMP_2. 1 hit.
PS50267. NA_NEUROTRAN_SYMP_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EyeballImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EyeballImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EyeballImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EyeballImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EyeballImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EyeballImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EyeballImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EyeballImported.

Entry informationi

Entry nameiQ8BKG0_MOUSE
AccessioniPrimary (citable) accession number: Q8BKG0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: April 16, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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