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Q8BK55

- Q8BK55_MOUSE

UniProt

Q8BK55 - Q8BK55_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro

    GO - Biological processi

    1. bundle of His cell to Purkinje myocyte communication Source: Ensembl
    2. homophilic cell adhesion Source: InterPro
    3. maternal process involved in female pregnancy Source: Ensembl
    4. regulation of heart rate by cardiac conduction Source: Ensembl
    5. response to progesterone Source: Ensembl
    6. ventricular cardiac muscle cell action potential Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Subcellular locationi

    GO - Cellular componenti

    1. apical plasma membrane Source: Ensembl
    2. lateral plasma membrane Source: Ensembl

    Expressioni

    Gene expression databases

    ArrayExpressiQ8BK55.
    BgeeiQ8BK55.
    GenevestigatoriQ8BK55.

    Family & Domainsi

    Phylogenomic databases

    InParanoidiQ8BK55.

    Family and domain databases

    Gene3Di4.10.900.10. 1 hit.
    InterProiIPR000233. Cadherin_cytoplasmic-dom.
    IPR027397. Catenin_binding_dom.
    IPR009123. Desmoglein.
    IPR009122. Desmosomal_cadherin.
    [Graphical view]
    PANTHERiPTHR24025. PTHR24025. 1 hit.
    PfamiPF01049. Cadherin_C. 1 hit.
    [Graphical view]
    PRINTSiPR01818. DESMOCADHERN.
    PR01819. DESMOGLEIN.

    Sequencei

    Sequence statusi: Fragment.

    Q8BK55-1 [UniParc]FASTAAdd to Basket

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    NEGAPPEDKV VPSLLVADHA ESSAVRGGVG GAMLKEGMKG SSSASVTKGQ    50
    HELSEVDGRW EEHRSLLTAG ATHHVRTAGT IAANEAVRTR ATGSSRDMSG 100
    ARGAVAVNEE FLRSYFTEKA ASYNGEDDLH MAKDCLLVYS QEDTASLRGS 150
    VGCCSFIEGE LDDLFLDDLG LKFKTLAEVC LGRKIDLDVD IEQRQKPVRE 200
    ASVSAASGSH YEQAVTSSES AYSSNTGFPA PKPLHEVHTE KVTQEIVTES 250
    SVSSRQSQKV VPPPDPVASG NIIVTETSYA KGSAVPPSTV LLAPRQPQSL 300
    IVTERVYAPT STLVDQHYAN EEKVLVTERV IQPNGGIPKP LEVTQHLKDA 350
    QYVMVRERES ILAPSSGVQP TLAMPSVAAG GQNVTVTERI LTPASTLQSS 400
    YQIPSETSIT ARNTVLSSVG SIGPLPNLDL EESDRPNSTI TTSSTRVTKH 450
    STMQHSYS 458
    Length:458
    Mass (Da):48,849
    Last modified:March 1, 2003 - v1
    Checksum:iC5B8486DF5FD566F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK076345 mRNA. Translation: BAC36305.1.
    UniGeneiMm.345891.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK076345 mRNA. Translation: BAC36305.1 .
    UniGenei Mm.345891.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    InParanoidi Q8BK55.

    Miscellaneous databases

    ChiTaRSi DSG2. mouse.

    Gene expression databases

    ArrayExpressi Q8BK55.
    Bgeei Q8BK55.
    Genevestigatori Q8BK55.

    Family and domain databases

    Gene3Di 4.10.900.10. 1 hit.
    InterProi IPR000233. Cadherin_cytoplasmic-dom.
    IPR027397. Catenin_binding_dom.
    IPR009123. Desmoglein.
    IPR009122. Desmosomal_cadherin.
    [Graphical view ]
    PANTHERi PTHR24025. PTHR24025. 1 hit.
    Pfami PF01049. Cadherin_C. 1 hit.
    [Graphical view ]
    PRINTSi PR01818. DESMOCADHERN.
    PR01819. DESMOGLEIN.
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: SkinImported.

    Entry informationi

    Entry nameiQ8BK55_MOUSE
    AccessioniPrimary (citable) accession number: Q8BK55
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)