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Q8BJZ4

- RT35_MOUSE

UniProt

Q8BJZ4 - RT35_MOUSE

Protein

28S ribosomal protein S35, mitochondrial

Gene

Mrps35

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 2 (07 Feb 2006)
      Previous versions | rss
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    Functioni

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    28S ribosomal protein S35, mitochondrial
    Short name:
    MRP-S35
    Short name:
    S35mt
    Gene namesi
    Name:Mrps35Imported
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 6

    Organism-specific databases

    MGIiMGI:2385255. Mrps35.

    Subcellular locationi

    Mitochondrion By similarity

    GO - Cellular componenti

    1. mitochondrial small ribosomal subunit Source: UniProtKB
    2. mitochondrion Source: MGI

    Keywords - Cellular componenti

    Mitochondrion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini? – 32028S ribosomal protein S35, mitochondrialPRO_0000046056
    Transit peptidei1 – ?MitochondrionCurated

    Proteomic databases

    MaxQBiQ8BJZ4.
    PaxDbiQ8BJZ4.
    PRIDEiQ8BJZ4.

    PTM databases

    PhosphoSiteiQ8BJZ4.

    Expressioni

    Gene expression databases

    BgeeiQ8BJZ4.
    CleanExiMM_MRPS35.
    GenevestigatoriQ8BJZ4.

    Interactioni

    Subunit structurei

    Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.By similarity

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000048348.

    Family & Domainsi

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiNOG267668.
    GeneTreeiENSGT00390000003443.
    HOGENOMiHOG000045127.
    HOVERGENiHBG082941.
    InParanoidiB2KFS5.
    KOiK17413.
    OrthoDBiEOG7QG44D.
    PhylomeDBiQ8BJZ4.
    TreeFamiTF318686.

    Family and domain databases

    InterProiIPR019349. Ribosomal_S24/S35_mit.
    [Graphical view]
    PfamiPF10213. MRP-S28. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q8BJZ4-1 [UniParc]FASTAAdd to Basket

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    MAAAALQLRQ SLCPGPRVLR TFSSVASPAA PRAGPRTASR SERPMRRKAL    50
    PPRTEKMDTD QDWPSVYPTA APFKPSAVPL PVRMGYPVKK GVPMAKEGNL 100
    ELLKIPNFLH LTPVAIKRHC AALKDFCTEW PAALDSDEKC EEHFPVEIDT 150
    ADYVSSGPSI RNPKARAVTL RVKLSSLNLD NHAKKKLIKL VGERYCKATD 200
    VLTITTDRCP LKRQNYDYAV YLLTVLYHES WKTEDWENSK TEEDMDEYVW 250
    AKSSSENSVL QTLLQMRAAE SSVAPSREEL LGTKEVEDYQ KCVVRLKNEG 300
    ENEASLAQYK ESVKRLLNLA 320
    Length:320
    Mass (Da):35,975
    Last modified:February 7, 2006 - v2
    Checksum:i83A35D706DFB806E
    GO

    Sequence cautioni

    The sequence AAH19964.1 differs from that shown. Reason: Erroneous initiation.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti11 – 111S → T in BAC36950. (PubMed:16141072)Curated
    Sequence conflicti11 – 111S → T in BAE41824. (PubMed:16141072)Curated
    Sequence conflicti16 – 161P → A in BAC36950. (PubMed:16141072)Curated
    Sequence conflicti16 – 161P → A in BAE41824. (PubMed:16141072)Curated
    Sequence conflicti216 – 2161Y → C in BAC36950. (PubMed:16141072)Curated
    Sequence conflicti216 – 2161Y → C in BAE41824. (PubMed:16141072)Curated
    Sequence conflicti293 – 2931V → I in BAC36950. (PubMed:16141072)Curated
    Sequence conflicti293 – 2931V → I in BAE41824. (PubMed:16141072)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK077677 mRNA. Translation: BAC36950.1.
    AK170480 mRNA. Translation: BAE41824.1.
    CU207396 Genomic DNA. Translation: CAQ51866.1.
    BC019964 mRNA. Translation: AAH19964.1. Different initiation.
    CCDSiCCDS51959.1.
    RefSeqiNP_663548.2. NM_145573.2.
    UniGeneiMm.46656.

    Genome annotation databases

    EnsembliENSMUST00000036111; ENSMUSP00000048348; ENSMUSG00000040112.
    GeneIDi232536.
    KEGGimmu:232536.
    UCSCiuc009ess.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK077677 mRNA. Translation: BAC36950.1 .
    AK170480 mRNA. Translation: BAE41824.1 .
    CU207396 Genomic DNA. Translation: CAQ51866.1 .
    BC019964 mRNA. Translation: AAH19964.1 . Different initiation.
    CCDSi CCDS51959.1.
    RefSeqi NP_663548.2. NM_145573.2.
    UniGenei Mm.46656.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000048348.

    PTM databases

    PhosphoSitei Q8BJZ4.

    Proteomic databases

    MaxQBi Q8BJZ4.
    PaxDbi Q8BJZ4.
    PRIDEi Q8BJZ4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000036111 ; ENSMUSP00000048348 ; ENSMUSG00000040112 .
    GeneIDi 232536.
    KEGGi mmu:232536.
    UCSCi uc009ess.1. mouse.

    Organism-specific databases

    CTDi 60488.
    MGIi MGI:2385255. Mrps35.

    Phylogenomic databases

    eggNOGi NOG267668.
    GeneTreei ENSGT00390000003443.
    HOGENOMi HOG000045127.
    HOVERGENi HBG082941.
    InParanoidi B2KFS5.
    KOi K17413.
    OrthoDBi EOG7QG44D.
    PhylomeDBi Q8BJZ4.
    TreeFami TF318686.

    Miscellaneous databases

    NextBioi 381143.
    PROi Q8BJZ4.
    SOURCEi Search...

    Gene expression databases

    Bgeei Q8BJZ4.
    CleanExi MM_MRPS35.
    Genevestigatori Q8BJZ4.

    Family and domain databases

    InterProi IPR019349. Ribosomal_S24/S35_mit.
    [Graphical view ]
    Pfami PF10213. MRP-S28. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6JImported and NODImported.
      Tissue: EmbryoImported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6J.
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 4-320.
      Strain: FVB/NImported.
      Tissue: LiverImported.

    Entry informationi

    Entry nameiRT35_MOUSE
    AccessioniPrimary (citable) accession number: Q8BJZ4
    Secondary accession number(s): B2KFS5, Q8VCG7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 7, 2006
    Last sequence update: February 7, 2006
    Last modified: October 1, 2014
    This is version 74 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

    External Data

    Dasty 3