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Protein
Submitted name:

Putative uncharacterized protein

Gene

Pde5a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Pde5aImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:2651499. Pde5a.

Expressioni

Gene expression databases

GenevestigatoriQ8BJ62.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000069011.

Structurei

3D structure databases

ProteinModelPortaliQ8BJ62.
SMRiQ8BJ62. Positions 11-281.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000202764.
HOVERGENiHBG068014.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8BJ62-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPFGDKTRD MVNAWFSERV HNIPVCKEGI RAHTESCSCS LQQSPHADNT
60 70 80 90 100
TPGAPARKIS ASEFDRPLRP IVVKDSEGTV SFLSDSGKKE QMPLTPPRFD
110 120 130 140 150
SDEGDQCSRL LELVKDISSH LDVTALCHKI FLHIHGLISA DRYSLFLVCE
160 170 180 190 200
DSSKDKFLIS RLFDVAEGST LEEASNNCIR LEWNKGIVGH VAAFGEPLNI
210 220 230 240 250
KDAYEDPRFN AEVDQITGYK TQSILCMPIK NHREEVVGVA QAINKKSGNG
260 270 280
GTFTEKDEKV TKPEAGMMPA ERDSFSLWHM TSGVRPC
Length:287
Mass (Da):31,868
Last modified:February 28, 2003 - v1
Checksum:iF4461B293B7C1C93
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK031275 mRNA. Translation: BAC27332.1.
UniGeneiMm.134911.

Genome annotation databases

UCSCiuc008reu.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK031275 mRNA. Translation: BAC27332.1.
UniGeneiMm.134911.

3D structure databases

ProteinModelPortaliQ8BJ62.
SMRiQ8BJ62. Positions 11-281.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000069011.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiuc008reu.1. mouse.

Organism-specific databases

MGIiMGI:2651499. Pde5a.

Phylogenomic databases

HOGENOMiHOG000202764.
HOVERGENiHBG068014.

Miscellaneous databases

ChiTaRSiPde5a. mouse.
SOURCEiSearch...

Gene expression databases

GenevestigatoriQ8BJ62.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TestisImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TestisImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TestisImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2000)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TestisImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TestisImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TestisImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2004)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TestisImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: TestisImported.

Entry informationi

Entry nameiQ8BJ62_MOUSE
AccessioniPrimary (citable) accession number: Q8BJ62
Entry historyi
Integrated into UniProtKB/TrEMBL: February 28, 2003
Last sequence update: February 28, 2003
Last modified: March 31, 2015
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.