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Q8BHB2 (Q8BHB2_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 104. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Ehmt1 MGI 1924933
OrganismMus musculus (Mouse) EMBL BAC33756.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length917 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains 7 ANK repeats. RuleBase RU003321

Contains SET domain. SAAS SAAS001214

Contains pre-SET domain. SAAS SAAS001214

Sequences

Sequence LengthMass (Da)Tools
Q8BHB2 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 3925B0891108F2F8

FASTA917101,018
        10         20         30         40         50         60 
MSETDRAAKM DGDSEEEQES PDTGEDEDGG DESDLSSESS IKKKFLKRRG KTDSPWIKPA 

        70         80         90        100        110        120 
RKRRRRSRKK PSSMLGSEAC KSSPGSMEQA ALGDSAGYME VSLDSLDLRV RGILSSQTEN 

       130        140        150        160        170        180 
EGLASGPDVL GTDGLQEVPL CSCRMETPKS REISTLANNQ CMATESVDHE LGRCTNSVVK 

       190        200        210        220        230        240 
YELMRPSNKA PLLVLCEDHR GRMVKHQCCP GCGYFCTAGN FMECQPESSI SHRFHKDCAS 

       250        260        270        280        290        300 
RVNNASYCPH CGEEASKAKE VTIAKADTTS TVTLAPGQEK SLAAEGRADT TTGSIAGAPE 

       310        320        330        340        350        360 
DERSQSTAPQ APECFDPAGP AGLVRPTSGL SQGPGKETLE SALIALDSEK PKKLRFHPKQ 

       370        380        390        400        410        420 
LYFSARQGEL QKVLLMLVDG IDPNFKMEHQ SKRSPLHAAA EAGHVDICHM LVQAGANIDT 

       430        440        450        460        470        480 
CSEDQRTPLM EAAENNHLDA VKYLIKAGAQ VDPKDAEGST CLHLAAKKGH YDVVQYLLSN 

       490        500        510        520        530        540 
GQMDVNCQDD GGWTPMIWAT EYKHVELVKL LLSKGSDINI RDNEENICLH WAAFSGCVDI 

       550        560        570        580        590        600 
AEILLAAKCD LHAVNIHGDS PLHIAARENR YDCVVLFLSR DSDVTLKNKE GETPLQCASL 

       610        620        630        640        650        660 
SSQVWSALQM SKALRDSAPD KPVAVEKTVS RDIARGYERI PIPCVNAVDS ELCPTNYKYV 

       670        680        690        700        710        720 
SQNCVTSPMN IDRNITHLQY CVCVDDCSSS TCMCGQLSMR CWYDKDGRLL PEFNMAEPPL 

       730        740        750        760        770        780 
IFECNHACSC WRNCRNRVVQ NGLRARLQLY RTQDMGWGVR SLQDIPLGTF VCEYVGELIS 

       790        800        810        820        830        840 
DSEADVREED SYLFDLDNKD GEVYCIDARF YGNVSRFINH HCEPNLVPVR VFMSHQDLRF 

       850        860        870        880        890        900 
PRIAFFSTRL IQAGEQLGFD YGERFWDVKG KLFSCRCGSS KCRHSSAALA QRQASAAQEP 

       910 
QENGLPDTSS AAAADPL 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC33756.1.
Tissue: Head EMBL BAC38402.1, Heart EMBL BAC34869.1 and Whole body EMBL BAC33756.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC33756.1.
Tissue: Head EMBL BAC38402.1, Heart EMBL BAC34869.1 and Whole body EMBL BAC33756.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC33756.1.
Tissue: Head EMBL BAC38402.1, Heart EMBL BAC34869.1 and Whole body EMBL BAC33756.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC33756.1.
Tissue: Head EMBL BAC38402.1, Heart EMBL BAC34869.1 and Whole body EMBL BAC33756.1.
[5]Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K. expand/collapse author list , Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., Hayashizaki Y.
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC33756.1.
Tissue: Heart EMBL BAC34869.1 and Whole body EMBL BAC33756.1.
[6]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC33756.1.
Tissue: Head EMBL BAC38402.1, Heart EMBL BAC34869.1 and Whole body EMBL BAC33756.1.
[7]Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K. expand/collapse author list , Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., Hayashizaki Y.
Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC38402.1.
Tissue: Head EMBL BAC38402.1.
[8]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC33756.1.
Tissue: Head EMBL BAC38402.1, Heart EMBL BAC34869.1 and Whole body EMBL BAC33756.1.
[9]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAC33756.1.
Tissue: Head EMBL BAC38402.1, Heart EMBL BAC34869.1 and Whole body EMBL BAC33756.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK049454 mRNA. Translation: BAC33756.1.
AK052174 mRNA. Translation: BAC34869.1.
AK082062 mRNA. Translation: BAC38402.1.
RefSeqNP_766133.2. NM_172545.4.
UniGeneMm.24176.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID77683.
KEGGmmu:77683.

Organism-specific databases

CTD79813.
MGIMGI:1924933. Ehmt1.

Phylogenomic databases

HOGENOMHOG000231216.
HOVERGENHBG028394.
InParanoidQ8BHB2.
KOK11420.

Gene expression databases

GenevestigatorQ8BHB2.

Family and domain databases

Gene3D1.25.40.20. 1 hit.
InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR001214. SET_dom.
[Graphical view]
PfamPF00023. Ank. 1 hit.
PF12796. Ank_2. 2 hits.
PF05033. Pre-SET. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
PRINTSPR01415. ANKYRIN.
SMARTSM00248. ANK. 7 hits.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF48403. SSF48403. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 5 hits.
PS50867. PRE_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio347359.
SOURCESearch...

Entry information

Entry nameQ8BHB2_MOUSE
AccessionPrimary (citable) accession number: Q8BHB2
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: July 9, 2014
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)