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Q8BGP4

- Q8BGP4_MOUSE

UniProt

Q8BGP4 - Q8BGP4_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Adamts5

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 91 (01 Oct 2014)
      Sequence version 1 (01 Mar 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metalloendopeptidase activity Source: InterPro
    2. metallopeptidase activity Source: MGI
    3. zinc ion binding Source: InterPro

    GO - Biological processi

    1. defense response to bacterium Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Adamts5Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1346321. Adamts5.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: Ensembl
    2. nucleus Source: Ensembl
    3. proteinaceous extracellular matrix Source: InterPro

    Expressioni

    Gene expression databases

    GenevestigatoriQ8BGP4.

    Family & Domainsi

    Sequence similaritiesi

    Contains peptidase M12B domain.SAAS annotation

    Phylogenomic databases

    HOVERGENiHBG004313.
    InParanoidiQ8BGP4.
    KOiK08620.

    Family and domain databases

    Gene3Di3.40.390.10. 1 hit.
    InterProiIPR010294. ADAM_spacer1.
    IPR024079. MetalloPept_cat_dom.
    IPR001590. Peptidase_M12B.
    IPR013273. Peptidase_M12B_ADAM-TS.
    IPR000884. Thrombospondin_1_rpt.
    [Graphical view]
    PfamiPF05986. ADAM_spacer1. 1 hit.
    PF01421. Reprolysin. 1 hit.
    PF00090. TSP_1. 2 hits.
    [Graphical view]
    PRINTSiPR01857. ADAMTSFAMILY.
    SMARTiSM00209. TSP1. 2 hits.
    [Graphical view]
    SUPFAMiSSF82895. SSF82895. 2 hits.
    PROSITEiPS50215. ADAM_MEPRO. 1 hit.
    PS50092. TSP1. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q8BGP4-1 [UniParc]FASTAAdd to Basket

    « Hide

    ENHIRLAVVK VVVLTDKDTS LEVSKNAATT LKNFCKWQHQ HNQLGDDHEE    50
    HYDAAILFTR EDLCGHHSCD TLGMADVGTI CSPERSCAVI EDDGLHAAFT 100
    VAHEIGHLLG LSHDDSKFCE ENFGTTEDKR LMSSILTSID ASKPWSKCTS 150
    ATITEFLDDG HGNCLLDLPR KQILGPEELP GQTYDATQQC NLTFGPEYSV 200
    CPGMDVCARL WCAVVRQGQM VCLTKKLPAV EGTPCGKGRV CLQGKCVDKT 250
    KKKYYSTSSH GNWGSWGPWG QCSRSCGGGV QFAYRHCNNP APRNSGRYCT 300
    GKRAIYRSCS VTPCPPNGKS FRHEQCEAKN GYQSDAKGVK TFVEWVPKYA 350
    GVLPADVCKL TCRAKGTGYY VVFSPKVTDG TECRPYSNSV CVRGRCVRTG 400
    CDGIIGSKLQ YDKCGVCGGD NSSCTKIIGT FNKKSKGYTD VVRIPEGATH 450
    IKVRQFKAKD QTRFTAYLAL KKKTGEYLIN GKYMISTSET IIDINGTVMN 500
    YSGWSHRDDF LHGMGYSATK EILIVQILAT DPTKALDVRY SFFVPKKTTQ 550
    KVNSVISHGS NKVGPHSTQL QWVTGPWLAC SRTCDTGWHT RTVQCQDGNR 600
    KLAKGCLLSQ RPSAFKQCLL KKC 623
    Length:623
    Mass (Da):68,681
    Last modified:March 1, 2003 - v1
    Checksum:i80CE9BCD0AC37502
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK044746 mRNA. Translation: BAC32062.1.
    AK082475 mRNA. Translation: BAC38503.1.
    RefSeqiNP_035912.2. NM_011782.2.
    UniGeneiMm.112933.
    Mm.437478.

    Genome annotation databases

    GeneIDi23794.
    KEGGimmu:23794.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK044746 mRNA. Translation: BAC32062.1 .
    AK082475 mRNA. Translation: BAC38503.1 .
    RefSeqi NP_035912.2. NM_011782.2.
    UniGenei Mm.112933.
    Mm.437478.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 23794.
    KEGGi mmu:23794.

    Organism-specific databases

    CTDi 11096.
    MGIi MGI:1346321. Adamts5.

    Phylogenomic databases

    HOVERGENi HBG004313.
    InParanoidi Q8BGP4.
    KOi K08620.

    Miscellaneous databases

    NextBioi 303403.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q8BGP4.

    Family and domain databases

    Gene3Di 3.40.390.10. 1 hit.
    InterProi IPR010294. ADAM_spacer1.
    IPR024079. MetalloPept_cat_dom.
    IPR001590. Peptidase_M12B.
    IPR013273. Peptidase_M12B_ADAM-TS.
    IPR000884. Thrombospondin_1_rpt.
    [Graphical view ]
    Pfami PF05986. ADAM_spacer1. 1 hit.
    PF01421. Reprolysin. 1 hit.
    PF00090. TSP_1. 2 hits.
    [Graphical view ]
    PRINTSi PR01857. ADAMTSFAMILY.
    SMARTi SM00209. TSP1. 2 hits.
    [Graphical view ]
    SUPFAMi SSF82895. SSF82895. 2 hits.
    PROSITEi PS50215. ADAM_MEPRO. 1 hit.
    PS50092. TSP1. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported and RetinaImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported and RetinaImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported and RetinaImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported and RetinaImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: RetinaImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported and RetinaImported.
    7. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported.
    8. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported and RetinaImported.
    9. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: CerebellumImported and RetinaImported.

    Entry informationi

    Entry nameiQ8BGP4_MOUSE
    AccessioniPrimary (citable) accession number: Q8BGP4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2003
    Last sequence update: March 1, 2003
    Last modified: October 1, 2014
    This is version 91 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)