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Protein
Submitted name:

Putative uncharacterized protein

Gene

Adamts5

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • defense response to bacterium Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Adamts5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1346321. Adamts5.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

ExpressionAtlasiQ8BGP4. baseline and differential.
GenevestigatoriQ8BGP4.

Structurei

3D structure databases

ProteinModelPortaliQ8BGP4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains peptidase M12B domain.SAAS annotation

Phylogenomic databases

HOVERGENiHBG004313.
KOiK08620.

Family and domain databases

Gene3Di3.40.390.10. 1 hit.
InterProiIPR010294. ADAM_spacer1.
IPR024079. MetalloPept_cat_dom.
IPR001590. Peptidase_M12B.
IPR013273. Peptidase_M12B_ADAM-TS.
IPR000884. Thrombospondin_1_rpt.
[Graphical view]
PfamiPF05986. ADAM_spacer1. 1 hit.
PF01421. Reprolysin. 1 hit.
PF00090. TSP_1. 2 hits.
[Graphical view]
PRINTSiPR01857. ADAMTSFAMILY.
SMARTiSM00209. TSP1. 2 hits.
[Graphical view]
SUPFAMiSSF82895. SSF82895. 2 hits.
PROSITEiPS50215. ADAM_MEPRO. 1 hit.
PS50092. TSP1. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8BGP4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ENHIRLAVVK VVVLTDKDTS LEVSKNAATT LKNFCKWQHQ HNQLGDDHEE
60 70 80 90 100
HYDAAILFTR EDLCGHHSCD TLGMADVGTI CSPERSCAVI EDDGLHAAFT
110 120 130 140 150
VAHEIGHLLG LSHDDSKFCE ENFGTTEDKR LMSSILTSID ASKPWSKCTS
160 170 180 190 200
ATITEFLDDG HGNCLLDLPR KQILGPEELP GQTYDATQQC NLTFGPEYSV
210 220 230 240 250
CPGMDVCARL WCAVVRQGQM VCLTKKLPAV EGTPCGKGRV CLQGKCVDKT
260 270 280 290 300
KKKYYSTSSH GNWGSWGPWG QCSRSCGGGV QFAYRHCNNP APRNSGRYCT
310 320 330 340 350
GKRAIYRSCS VTPCPPNGKS FRHEQCEAKN GYQSDAKGVK TFVEWVPKYA
360 370 380 390 400
GVLPADVCKL TCRAKGTGYY VVFSPKVTDG TECRPYSNSV CVRGRCVRTG
410 420 430 440 450
CDGIIGSKLQ YDKCGVCGGD NSSCTKIIGT FNKKSKGYTD VVRIPEGATH
460 470 480 490 500
IKVRQFKAKD QTRFTAYLAL KKKTGEYLIN GKYMISTSET IIDINGTVMN
510 520 530 540 550
YSGWSHRDDF LHGMGYSATK EILIVQILAT DPTKALDVRY SFFVPKKTTQ
560 570 580 590 600
KVNSVISHGS NKVGPHSTQL QWVTGPWLAC SRTCDTGWHT RTVQCQDGNR
610 620
KLAKGCLLSQ RPSAFKQCLL KKC
Length:623
Mass (Da):68,681
Last modified:March 1, 2003 - v1
Checksum:i80CE9BCD0AC37502
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK044746 mRNA. Translation: BAC32062.1.
AK082475 mRNA. Translation: BAC38503.1.
RefSeqiNP_035912.2. NM_011782.2.
UniGeneiMm.112933.
Mm.437478.

Genome annotation databases

GeneIDi23794.
KEGGimmu:23794.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK044746 mRNA. Translation: BAC32062.1.
AK082475 mRNA. Translation: BAC38503.1.
RefSeqiNP_035912.2. NM_011782.2.
UniGeneiMm.112933.
Mm.437478.

3D structure databases

ProteinModelPortaliQ8BGP4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi23794.
KEGGimmu:23794.

Organism-specific databases

CTDi11096.
MGIiMGI:1346321. Adamts5.

Phylogenomic databases

HOVERGENiHBG004313.
KOiK08620.

Miscellaneous databases

NextBioi303403.
SOURCEiSearch...

Gene expression databases

ExpressionAtlasiQ8BGP4. baseline and differential.
GenevestigatoriQ8BGP4.

Family and domain databases

Gene3Di3.40.390.10. 1 hit.
InterProiIPR010294. ADAM_spacer1.
IPR024079. MetalloPept_cat_dom.
IPR001590. Peptidase_M12B.
IPR013273. Peptidase_M12B_ADAM-TS.
IPR000884. Thrombospondin_1_rpt.
[Graphical view]
PfamiPF05986. ADAM_spacer1. 1 hit.
PF01421. Reprolysin. 1 hit.
PF00090. TSP_1. 2 hits.
[Graphical view]
PRINTSiPR01857. ADAMTSFAMILY.
SMARTiSM00209. TSP1. 2 hits.
[Graphical view]
SUPFAMiSSF82895. SSF82895. 2 hits.
PROSITEiPS50215. ADAM_MEPRO. 1 hit.
PS50092. TSP1. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported and RetinaImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported and RetinaImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported and RetinaImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported and RetinaImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: RetinaImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported and RetinaImported.
  7. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  8. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported and RetinaImported.
  9. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported and RetinaImported.

Entry informationi

Entry nameiQ8BGP4_MOUSE
AccessioniPrimary (citable) accession number: Q8BGP4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: May 27, 2015
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.