Q8BG62 (Q8BG62_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RIKEN cDNA 2610044O15 gene EMBL AAH23890.1

Gene names

Name:

2610044O15Rik MGI 1919389

Organism

Mus musculus (Mouse) EMBL AAH23890.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	88 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 1V65
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8BG62 [UniParc]. Last modified March 1, 2003. Version 1. Checksum: C0FB727C34BB3185	FASTA	88	10,771
	10 20 30 40 50 60 MDAVTYDDVH MNFTEEEWDL LDSSQKRLYE EVMLETYQNL TDIGYNWQDH HIEEHCQSSR 70 80 RHERHERSHI GEKPYERNQC GDYSYMIG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Antisense Transcription in the Mammalian Transcriptome." RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium Science 309:1564-1566(2005) [PubMed: 16141073] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26461.1. Tissue: Head EMBL BAC26461.1 and Hypothalamus EMBL BAE23559.1.
[2]	"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer." Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y. Genome Res. 10:1757-1771(2000) [PubMed: 11076861] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26461.1. Tissue: Head EMBL BAC26461.1 and Hypothalamus EMBL BAE23559.1.
[3]	"Functional annotation of a full-length mouse cDNA collection." The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature 409:685-690(2001) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26461.1. Tissue: Head EMBL BAC26461.1 and Hypothalamus EMBL BAE23559.1.
[4]	"High-efficiency full-length cDNA cloning." Carninci P., Hayashizaki Y. Methods Enzymol. 303:19-44(1999) [PubMed: 10349636] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26461.1. Tissue: Head EMBL BAC26461.1 and Hypothalamus EMBL BAE23559.1.
[5]	"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes." Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y. Genome Res. 10:1617-1630(2000) [PubMed: 11042159] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26461.1. Tissue: Head EMBL BAC26461.1 and Hypothalamus EMBL BAE23559.1.
[6]	"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team Nature 420:563-573(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26461.1. Tissue: Head EMBL BAC26461.1 and Hypothalamus EMBL BAE23559.1.
[7]	"The Transcriptional Landscape of the Mammalian Genome." The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science 309:1559-1563(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26461.1. Tissue: Head EMBL BAC26461.1 and Hypothalamus EMBL BAE23559.1.
[8]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: Mix FVB/N EMBL AAH23890.1. Tissue: Mammary tumor. WAP-TGF alpha model. 7 months old EMBL AAH23890.1.
[9]	Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y. Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE23559.1. Tissue: Hypothalamus EMBL BAE23559.1.
[10]	"Solution structure of the Kruppel-associated box (KRAB) domain." Saito K., Koshiba S., Inoue M., Kigawa T., Yokoyama S. Submitted (NOV-2003) to the PDB data bank Cited for: STRUCTURE BY NMR OF 4-54.
[11]	Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K. , Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., Hayashizaki Y. Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAC26461.1. Tissue: Head EMBL BAC26461.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BC023890 mRNA. Translation: AAH23890.1.
AK029464 mRNA. Translation: BAC26461.1.
AK138138 mRNA. Translation: BAE23559.1.

IPI

IPI00221488.

RefSeq

NP_722475.1. NM_153780.2.

UniGene

Mm.426514.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1V65	NMR	-	A	4-54	[»]

ProteinModelPortal

Q8BG62.

SMR

Q8BG62. Positions 3-59.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

72139.

KEGG

mmu:72139.

UCSC

uc008dwt.2. mouse.

Phylogenomic databases

HOVERGEN

HBG067759.

Gene expression databases

Genevestigator

Q8BG62.

Family and domain databases

InterPro

IPR001909. Krueppel-associated_box.
[Graphical view]

Pfam

PF01352. KRAB. 1 hit.
[Graphical view]

SMART

SM00349. KRAB. 1 hit.
[Graphical view]

SUPFAM

SSF109640. Krueppel-associated_box. 1 hit.

PROSITE

PS50805. KRAB. 1 hit.
[Graphical view]

ProtoNet

Search...

Other

NextBio

457798.

Entry information

Entry name

Q8BG62_MOUSE

Accession

Primary (citable) accession number: Q8BG62

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2003
Last sequence update:	March 1, 2003
Last modified:	October 19, 2011
This is version 69 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)