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Protein

Tetraspanin

Gene

cd9

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
TetraspaninUniRule annotation
Gene namesi
Name:cd9Imported
Synonyms:CD9Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 34HelicalUniRule annotationAdd BLAST23
Transmembranei54 – 74HelicalUniRule annotationAdd BLAST21
Transmembranei86 – 110HelicalUniRule annotationAdd BLAST25
Transmembranei138 – 161HelicalUniRule annotationAdd BLAST24
Transmembranei168 – 188HelicalUniRule annotationAdd BLAST21
Transmembranei194 – 217HelicalUniRule annotationAdd BLAST24

Keywords - Cellular componenti

Membrane

Family & Domainsi

Sequence similaritiesi

Belongs to the tetraspanin (TM4SF) family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

HOVERGENiHBG107328
KOiK06460

Family and domain databases

Gene3Di1.10.1450.10, 1 hit
InterProiView protein in InterPro
IPR000301 Tetraspanin
IPR018499 Tetraspanin/Peripherin
IPR008952 Tetraspanin_EC2_sf
PfamiView protein in Pfam
PF00335 Tetraspannin, 1 hit
PIRSFiPIRSF002419 Tetraspanin, 1 hit
PRINTSiPR00259 TMFOUR
SUPFAMiSSF48652 SSF48652, 1 hit

Sequencei

Sequence statusi: Complete.

Q8AYJ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALDGCGQLC KCILLLFNII FALVGFVMFG LGLWLRFSSE TRGLFNIDLN
60 70 80 90 100
TQQFVSVVSV LIVLGAVMLL VAVFGDYGAC NENKTALEVS SCLLSFLTVL
110 120 130 140 150
VIGAGGGAYV MSDEVGKQVA IFYTTVYAQY LDKQDPGLAV TLSMFHNVLH
160 170 180 190 200
CCGLLGGLDL LVKITCPITG FLGTLAVPAC PTVIINLLES KAPLVIGLFL
210 220 230
GTAAMMITAV VCCSILVKQI KRSHLSAPVY
Length:230
Mass (Da):24,439
Last modified:March 1, 2003 - v1
Checksum:i47CA62F25CDDFF17
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF427519 mRNA Translation: AAN63554.1
BT044935 mRNA Translation: ACI33197.1
RefSeqiNP_001117013.1, NM_001123541.1
XP_014048608.1, XM_014193133.1
XP_014048609.1, XM_014193134.1
UniGeneiSsa.23482

Genome annotation databases

GeneIDi100136380
KEGGisasa:100136380

Similar proteinsi

Entry informationi

Entry nameiQ8AYJ0_SALSA
AccessioniPrimary (citable) accession number: Q8AYJ0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: February 28, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health