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Q8AXI4 (Q8AXI4_GINCI) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Novel antigen receptor EMBL AAN75852.1
OrganismGinglymostoma cirratum (Nurse shark) EMBL AAN75852.1
Taxonomic identifier7801 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Chondrichthyes › Elasmobranchii › Galeomorphii › Galeoidea › Orectolobiformes › Ginglymostomatidae › Ginglymostoma

Protein attributes

Sequence length113 AA.
Sequence statusFragment.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Molecular functionReceptor EMBL AAN75852.1
   Technical term3D-structure PDB 1T6V PDB 1SQ2
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAN75852.1
Non-terminal residue1131 EMBL AAN75852.1

Sequences

Sequence LengthMass (Da)Tools
Q8AXI4 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 71522771FEA75661

FASTA11312,042
        10         20         30         40         50         60 
ARVDQTPRSV TKETGESLTI NCVLRDASYA LGSTCWYRKK SGEGNEESIS KGGRYVETVN 

        70         80         90        100        110 
SGSKSFSLRI NDLTVEDGGT YRCGLGVAGG YCDYALCSSR YAECGDGTAV TVN

« Hide

References

[1]"Selection and characterization of naturally occurring single-domain (IgNAR) antibody fragments from immunized sharks by phage display."
Dooley H., Flajnik M.F., Porter A.J.
Mol. Immunol. 40:25-33(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Crystal structure of a shark single-domain antibody V region in complex with lysozyme."
Stanfield R.L., Dooley H., Flajnik M.F., Wilson I.A.
Science 305:1770-1773(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.45 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF447096 mRNA. Translation: AAN75852.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1SQ2X-ray1.45N1-113[»]
1T6VX-ray1.70N/O1-113[»]
ProteinModelPortalQ8AXI4.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
[Graphical view]
PfamPF07686. V-set. 1 hit.
[Graphical view]
SMARTSM00409. IG. 1 hit.
[Graphical view]
PROSITEPS50835. IG_LIKE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ8AXI4.

Entry information

Entry nameQ8AXI4_GINCI
AccessionPrimary (citable) accession number: Q8AXI4
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: April 3, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info