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Protein
Submitted name:

CBPch04

Gene

cbpch04

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. chitinase activity Source: InterPro
  2. chitin binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. chitin catabolic process Source: InterPro
Complete GO annotation...

Protein family/group databases

CAZyiCBM14. Carbohydrate-Binding Module Family 14.
GH18. Glycoside Hydrolase Family 18.

Names & Taxonomyi

Protein namesi
Submitted name:
CBPch04Imported
Gene namesi
Name:cbpch04Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ8AV87.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000005554.

Structurei

3D structure databases

ProteinModelPortaliQ8AV87.
SMRiQ8AV87. Positions 22-394.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 18 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG3325.
HOGENOMiHOG000111109.
HOVERGENiHBG011684.
KOiK01183.
PhylomeDBiQ8AV87.

Family and domain databases

Gene3Di2.170.140.10. 1 hit.
3.10.50.10. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR002557. Chitin-bd_dom.
IPR011583. Chitinase_II.
IPR029070. Chitinase_insertion.
IPR001223. Glyco_hydro18cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01607. CBM_14. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
SMARTiSM00494. ChtBD2. 1 hit.
SM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF54556. SSF54556. 1 hit.
SSF57625. SSF57625. 1 hit.
PROSITEiPS50940. CHIT_BIND_II. 1 hit.
PS01095. CHITINASE_18. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8AV87-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAKLILITGL ALLLNAQIGS TYVLSCYFTN WAQYRPGLGK YMPDNIDPCL
60 70 80 90 100
CDHLIYAFAG MSNNEITTYE WNDETLYKSF NGLKNQNGNL KTLLAIGGWN
110 120 130 140 150
FGTAKFSTMV STPENRQTFI NSVIKFLRQY QFDGLDIDWE YPGSKGSPSQ
160 170 180 190 200
DKGLFTVLVQ EMLAAFEQEA KQVNKPRLMI TAAVAAGLSN IQAGYQIAEL
210 220 230 240 250
GKYLDYFHVM TYDFHGSWDG QTGENSPLYK GPADTGDLIY FNVDYAMNYW
260 270 280 290 300
KSNGAPAEKL LVGFPTYGHS YILKNPSDTA VGAPTSGPGP AGPYTRQSGF
310 320 330 340 350
LAYYEICTFL DSGATQAWDA PQDVPYAYKS SEWVGYGNIK SFNIKIDWLK
360 370 380 390 400
KNNYGGAMVW SLDMDDFTGT FCKQGKYPLI TTLKNALGQQ SSSCVPPAQP
410 420 430 440 450
NPPITAAPST GSGSGSGSGS GSSGSNTGSS GGSGFCAGKA NGIYADPTNK
460 470 480
SKFYNCNNGE TFVQSCQAGL VFDSSCSCCN WA
Length:482
Mass (Da):52,239
Last modified:March 1, 2003 - v1
Checksum:i68DB483D47907FD1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB071038 mRNA. Translation: BAC53757.1.
RefSeqiNP_989760.1. NM_204429.1.
UniGeneiGga.5005.

Genome annotation databases

GeneIDi395072.
KEGGigga:395072.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB071038 mRNA. Translation: BAC53757.1.
RefSeqiNP_989760.1. NM_204429.1.
UniGeneiGga.5005.

3D structure databases

ProteinModelPortaliQ8AV87.
SMRiQ8AV87. Positions 22-394.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000005554.

Protein family/group databases

CAZyiCBM14. Carbohydrate-Binding Module Family 14.
GH18. Glycoside Hydrolase Family 18.

Proteomic databases

PaxDbiQ8AV87.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi395072.
KEGGigga:395072.

Organism-specific databases

CTDi27159.

Phylogenomic databases

eggNOGiCOG3325.
HOGENOMiHOG000111109.
HOVERGENiHBG011684.
KOiK01183.
PhylomeDBiQ8AV87.

Miscellaneous databases

NextBioi20815165.

Family and domain databases

Gene3Di2.170.140.10. 1 hit.
3.10.50.10. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR002557. Chitin-bd_dom.
IPR011583. Chitinase_II.
IPR029070. Chitinase_insertion.
IPR001223. Glyco_hydro18cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01607. CBM_14. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
SMARTiSM00494. ChtBD2. 1 hit.
SM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF54556. SSF54556. 1 hit.
SSF57625. SSF57625. 1 hit.
PROSITEiPS50940. CHIT_BIND_II. 1 hit.
PS01095. CHITINASE_18. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Cellular expression of gut chitinase mRNA in the gastrointestinal tract of mice and chickens."
    Suzuki M., Fujimoto W., Goto M., Morimatsu M., Syuto B., Iwanaga T.
    J. Histochem. Cytochem. 50:1081-1089(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: LeghornImported.
    Tissue: Grandular stomachImported.

Entry informationi

Entry nameiQ8AV87_CHICK
AccessioniPrimary (citable) accession number: Q8AV87
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: February 4, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.