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Q8AV87 (Q8AV87_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
CBPch04 EMBL BAC53757.1
Gene names
Name:cbpch04 EMBL BAC53757.1
OrganismGallus gallus (Chicken) EMBL BAC53757.1
Taxonomic identifier9031 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Phasianinae › Gallus

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Sequences

Sequence LengthMass (Da)Tools
Q8AV87 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 68DB483D47907FD1

FASTA48252,239
        10         20         30         40         50         60 
MAKLILITGL ALLLNAQIGS TYVLSCYFTN WAQYRPGLGK YMPDNIDPCL CDHLIYAFAG 

        70         80         90        100        110        120 
MSNNEITTYE WNDETLYKSF NGLKNQNGNL KTLLAIGGWN FGTAKFSTMV STPENRQTFI 

       130        140        150        160        170        180 
NSVIKFLRQY QFDGLDIDWE YPGSKGSPSQ DKGLFTVLVQ EMLAAFEQEA KQVNKPRLMI 

       190        200        210        220        230        240 
TAAVAAGLSN IQAGYQIAEL GKYLDYFHVM TYDFHGSWDG QTGENSPLYK GPADTGDLIY 

       250        260        270        280        290        300 
FNVDYAMNYW KSNGAPAEKL LVGFPTYGHS YILKNPSDTA VGAPTSGPGP AGPYTRQSGF 

       310        320        330        340        350        360 
LAYYEICTFL DSGATQAWDA PQDVPYAYKS SEWVGYGNIK SFNIKIDWLK KNNYGGAMVW 

       370        380        390        400        410        420 
SLDMDDFTGT FCKQGKYPLI TTLKNALGQQ SSSCVPPAQP NPPITAAPST GSGSGSGSGS 

       430        440        450        460        470        480 
GSSGSNTGSS GGSGFCAGKA NGIYADPTNK SKFYNCNNGE TFVQSCQAGL VFDSSCSCCN 


WA

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References

[1]"Cellular expression of gut chitinase mRNA in the gastrointestinal tract of mice and chickens."
Suzuki M., Fujimoto W., Goto M., Morimatsu M., Syuto B., Iwanaga T.
J. Histochem. Cytochem. 50:1081-1089(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Leghorn EMBL BAC53757.1.
Tissue: Grandular stomach EMBL BAC53757.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB071038 mRNA. Translation: BAC53757.1.
IPIIPI00582664.
RefSeqNP_989760.1. NM_204429.1.
UniGeneGga.5005.

3D structure databases

HSSPHSSP built from PDB template 1LG2 based on UniProtKB Q13231.
ProteinModelPortalQ8AV87.
SMRQ8AV87. Positions 22-394.
ModBaseSearch...

Protein-protein interaction databases

STRING9031.ENSGALP00000005554.
Q8AV87.

Protein family/group databases

CAZyCBM14. Carbohydrate-Binding Module Family 14.
GH18. Glycoside Hydrolase Family 18.

Proteomic databases

PaxDbQ8AV87.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID395072.
KEGGgga:395072.

Organism-specific databases

CTD27159.

Phylogenomic databases

eggNOGCOG3325.
HOGENOMHOG000111109.
HOVERGENHBG011684.
InParanoidQ8AV87.
KOK01183.
OrthoDBEOG476K16.

Family and domain databases

Gene3D2.170.140.10. 1 hit.
3.20.20.80. 2 hits.
InterProIPR002557. Chitin-bd_dom.
IPR011583. Chitinase_II.
IPR001223. Glyco_hydro18cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF01607. CBM_14. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
SMARTSM00494. ChtBD2. 1 hit.
SM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMSSF57625. Chitin_bind_PerA. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS50940. CHIT_BIND_II. 1 hit.
PS01095. CHITINASE_18. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20815165.

Entry information

Entry nameQ8AV87_CHICK
AccessionPrimary (citable) accession number: Q8AV87
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: May 1, 2013
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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