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Q8A905 (Q8A905_BACTN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length483 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region248 – 2503Sulfate 5 binding PDB 3KZS

Sites

Binding site1121Sulfate 1; via amide nitrogen PDB 3KZS
Binding site1511Sulfate 2 PDB 3KZS
Binding site1621Sulfate 1 PDB 3KZS
Binding site1891Sulfate 3 PDB 3KZS
Binding site2181Sulfate 2 PDB 3KZS
Binding site2181Sulfate 3 PDB 3KZS
Binding site2431Sulfate 4 PDB 3KZS
Binding site2431Sulfate 5 PDB 3KZS
Binding site2951Sulfate 4 PDB 3KZS

Sequences

Sequence LengthMass (Da)Tools
Q8A905 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 2CE3CE31E9337A33

FASTA48356,026
        10         20         30         40         50         60 
MRKFKILPLL LLLLTLATSA AAQKKTQKTY IPWSNGKLVV SEEGRYLKHE NGTPFFWLGE 

        70         80         90        100        110        120 
TGWLLPERLN RDEAEYYLEQ CKRRGYNVIQ VQTLNNVPSM NIYGQYSMTD GYNFKNINQK 

       130        140        150        160        170        180 
GVYGYWDHMD YIIRTAAKKG LYIGMVCIWG SPVSHGEMNV DQAKAYGKFL AERYKDEPNI 

       190        200        210        220        230        240 
IWFIGGDIRG DVKTAEWEAL ATSIKAIDKN HLMTFHPRGR TTSATWFNNA PWLDFNMFQS 

       250        260        270        280        290        300 
GHRRYGQRFG DGDYPIEENT EEDNWRFVER SMAMKPMKPV IDGEPIYEEI PHGLHDENEL 

       310        320        330        340        350        360 
LWKDYDVRRY AYWSVFAGSF GHTYGHNSIM QFIKPGVGGA YGAKKPWYDA LNDPGYNQMK 

       370        380        390        400        410        420 
YLKNLMLTFP FFERVPDQSV IAGQNGERYD RAIATRGNDY LMVYNYTGRP MEVDFSKISG 

       430        440        450        460        470        480 
AKKNAWWYTT KDGKLEYIGE FDNGVHKFQH DSGYSSGNDH VLIVVDSSKD YVKKDCYQID 


THE 

« Hide

References

« Hide 'large scale' references
[1]"A genomic view of the human-Bacteroides thetaiotaomicron symbiosis."
Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C., Hooper L.V., Gordon J.I.
Science 299:2074-2076(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482.
[2]"Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla."
Mahowald M.A., Rey F.E., Seedorf H., Turnbaugh P.J., Fulton R.S., Wollam A., Shah N., Wang C., Magrini V., Wilson R.K., Cantarel B.L., Coutinho P.M., Henrissat B., Crock L.W., Russell A., Verberkmoes N.C., Hettich R.L., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 106:5859-5864(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: VPI-5482 EMBL AAO76119.1.
[3]"Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution."
Joint Center for Structural Genomics (JCSG)
Submitted (DEC-2009) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) OF 22-483 IN COMPLEX WITH SULFATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE015928 Genomic DNA. Translation: AAO76119.1.
RefSeqNP_809925.1. NC_004663.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3KZSX-ray2.10A/B/C/D22-483[»]
ProteinModelPortalQ8A905.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING226186.BT_1012.

Protocols and materials databases

DNASU1075607.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAO76119; AAO76119; BT_1012.
GeneID1075607.
KEGGbth:BT_1012.
PATRIC21056837. VBIBacThe70966_1029.

Phylogenomic databases

OMAIGMVCIW.
OrthoDBEOG6DVJNW.

Enzyme and pathway databases

BioCycBTHE226186:GJXV-1030-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR024749. Collagen-bd_put.
IPR025277. DUF4038.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF12904. Collagen_bind_2. 1 hit.
PF13204. DUF4038. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ8A905.

Entry information

Entry nameQ8A905_BACTN
AccessionPrimary (citable) accession number: Q8A905
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: June 11, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)