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Protein
Submitted name:

SusD homolog

Gene

BT_1043

Organism
Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBTHE226186:GJXV-1061-MONOMER.
BRENDAi2.4.1.320. 709.

Names & Taxonomyi

Protein namesi
Submitted name:
SusD homologImported
Gene namesi
Ordered Locus Names:BT_1043Imported
OrganismiBacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)Imported
Taxonomic identifieri226186 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
Proteomesi
  • UP000001414 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 546528Sequence analysisPRO_5004303228Add
BLAST

Proteomic databases

PaxDbiQ8A8X4.

Interactioni

Protein-protein interaction databases

STRINGi226186.BT_1043.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3EHMX-ray2.00A/B18-546[»]
3EHNX-ray2.80A/B18-546[»]
ProteinModelPortaliQ8A8X4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8A8X4.

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

OMAiLYWFRAS.
OrthoDBiEOG61P6PV.

Family and domain databases

InterProiIPR024302. SusD-like.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PfamiPF12741. SusD-like. 1 hit.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8A8X4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKYIILLLA LCSMSACDYE AVNTNPYGVS DGELGPLKYG ARFMNMQQRV
60 70 80 90 100
IPIGSPSLTT GPGNDLQNTD LISSGNYIGY FGNNNNWGFN NEANWNFTDS
110 120 130 140 150
RMNYAYQNFY SQIFLPWNEI YEIAKDSDSP SEQAILEIAN IVRNIAWLRA
160 170 180 190 200
TDVFGPIAYN SAGDGSIAPK FDSQEVVYRS MLADLSKSVE LLNTISYSVM
210 220 230 240 250
AQYDLIYNGN VQNWVKLANS LMLRIAVRVH FIDETLAKEY ITKALDPKNG
260 270 280 290 300
GVIEDISSEA KIKSSDKMPL LNSMLASVNE YNETRMGATI WGYLDGYKDP
310 320 330 340 350
RLSAYFTEGT YGSGSWAQTG YFPVAPTNSK SKSETSYSAK FASRPKVDSN
360 370 380 390 400
SPLYWFRASE TYFLKAEAAL YNLIGGDPKT FYEQGINISF QEQGVSGVAT
410 420 430 440 450
YLSGTGKPTG LTGSNYKYGT YNHDLSIGNT SPKWDDYTGN LSKQEEQLQK
460 470 480 490 500
IITQKYLALY PNAVEAWTEY RRTGFPYLMK PMDEAAPGRI GASIEDCRVP
510 520 530 540
ERFRFAPTAY NSNPNMAEIP TLLGGGDIGA TKLWWVRSNR PKQPNQ
Length:546
Mass (Da):60,933
Last modified:June 1, 2003 - v1
Checksum:i6118654D4E0509CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015928 Genomic DNA. Translation: AAO76150.1.
RefSeqiNP_809956.1. NC_004663.1.
WP_011107593.1. NC_004663.1.

Genome annotation databases

EnsemblBacteriaiAAO76150; AAO76150; BT_1043.
GeneIDi1072221.
KEGGibth:BT_1043.
PATRICi21056899. VBIBacThe70966_1060.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015928 Genomic DNA. Translation: AAO76150.1.
RefSeqiNP_809956.1. NC_004663.1.
WP_011107593.1. NC_004663.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3EHMX-ray2.00A/B18-546[»]
3EHNX-ray2.80A/B18-546[»]
ProteinModelPortaliQ8A8X4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi226186.BT_1043.

Proteomic databases

PaxDbiQ8A8X4.

Protocols and materials databases

DNASUi1072221.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO76150; AAO76150; BT_1043.
GeneIDi1072221.
KEGGibth:BT_1043.
PATRICi21056899. VBIBacThe70966_1060.

Phylogenomic databases

OMAiLYWFRAS.
OrthoDBiEOG61P6PV.

Enzyme and pathway databases

BioCyciBTHE226186:GJXV-1061-MONOMER.
BRENDAi2.4.1.320. 709.

Miscellaneous databases

EvolutionaryTraceiQ8A8X4.

Family and domain databases

InterProiIPR024302. SusD-like.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PfamiPF12741. SusD-like. 1 hit.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A genomic view of the human-Bacteroides thetaiotaomicron symbiosis."
    Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C., Hooper L.V., Gordon J.I.
    Science 299:2074-2076(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482Imported.
  2. "Structure of a SusD homologue, BT1043, involved in mucin O-glycan utilization in a prominent human gut symbiont."
    Koropatkin N., Martens E.C., Gordon J.I., Smith T.J.
    Biochemistry 48:1532-1542(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 18-546.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482Imported.

Entry informationi

Entry nameiQ8A8X4_BACTN
AccessioniPrimary (citable) accession number: Q8A8X4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: March 16, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.