Reviewed,
UniProtKB/Swiss-Prot Q8A2B2 (AROK_BACTN)
Last modified
January 19, 2010.
Version 45.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Shikimate kinase Short name=SK EC=2.7.1.71 | ||||
| Gene names |
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| Organism | Bacteroides thetaiotaomicron [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 818 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides |
Protein attributes
| Sequence length | 175 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate By similarity. HAMAP MF_00109 |
| Catalytic activity | ATP + shikimate = ADP + shikimate 3-phosphate. HAMAP MF_00109 |
| Cofactor | Binds 1 magnesium ion per subunit By similarity. HAMAP MF_00109 |
| Pathway | Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 5/7. HAMAP MF_00109 |
| Subunit structure | Monomer By similarity. HAMAP MF_00109 |
| Subcellular location | Cytoplasm Probable HAMAP MF_00109. |
| Sequence similarities | Belongs to the shikimate kinase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Aromatic amino acid biosynthesis |
| Cellular component | Cytoplasm |
| Ligand | ATP-binding Magnesium Metal-binding Nucleotide-binding |
| Molecular function | Kinase Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | ATP binding Inferred from electronic annotation. Source: HAMAP magnesium ion bindingInferred from electronic annotation. Source: HAMAP shikimate kinase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 175 | 175 | Shikimate kinase HAMAP MF_00109 | PRO_0000237844 | |||||
Regions | |||||||||
| Nucleotide binding | 11 – 16 | 6 | ATP By similarity | ||||||
Sites | |||||||||
| Metal binding | 15 | 1 | Magnesium By similarity | ||||||
| Binding site | 33 | 1 | Substrate By similarity | ||||||
| Binding site | 57 | 1 | Substrate By similarity | ||||||
| Binding site | 79 | 1 | Substrate; via amide nitrogen By similarity | ||||||
| Binding site | 118 | 1 | ATP By similarity | ||||||
| Binding site | 140 | 1 | Substrate By similarity | ||||||
Sequences
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References
| [1] | "A genomic view of the human-Bacteroides thetaiotaomicron symbiosis." Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C., Hooper L.V., Gordon J.I. Science 299:2074-2076(2003) [PubMed: 12663928] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE015928 Genomic DNA. Translation: AAO78499.1. |
| RefSeq | NP_812305.1. |
3D structure databases | |
| SMR | Q8A2B2. Positions 2-174. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1074874. |
| GenomeReviews | Gene locus BT_3393 in contig AE015928_GR. |
| KEGG | bth:BT_3393. |
| NMPDR | fig|226186.1.peg.3392. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG335815. |
| OMA | VEKEGWE. |
| PhylomeDB | Q8A2B2. |
Enzyme and pathway databases | |
| BioCyc | BTHE226186:BT_3393-MONOMER. |
| BRENDA | 2.7.1.71. 21018. |
Family and domain databases | |
| HAMAP | MF_00109. Shikimate_kinase. [Tree] |
| InterPro | IPR000623. Shik_kinase. [Graphical view] |
| Pfam | PF01202. SKI. 1 hit. [Graphical view] |
| PRINTS | PR01100. SHIKIMTKNASE. |
| PROSITE | PS01128. SHIKIMATE_KINASE. False negative. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | AROK_BACTN | ||||||||
| Accession | Primary (citable) accession number: Q8A2B2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


