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Q8A0A6 (Q8A0A6_BACTN) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Pectate lyase EMBL AAO79220.1
Gene names
Ordered Locus Names:BT_4115
OrganismBacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Taxonomic identifier226186 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL AAO79220.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8A0A6 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 30773E329547B019

FASTA49754,577
        10         20         30         40         50         60 
MNKKILVGLC ALFMLPSIQG NTNTDNSYKE NATPDRSKVP AFPGADGAGK YTTGGAGGTV 

        70         80         90        100        110        120 
YTVTSLADDG SEGTFRWAIN KKGPRTIVFA VSGIIELQKP LKLSNGDVTI AGQTAPGDGI 

       130        140        150        160        170        180 
CLKNYTFSIQ ADNVIVRFIR SRMGADIKQK GDDAMNGTKG NSNIIIDHCS LSWCTDECAT 

       190        200        210        220        230        240 
FYDNSQFTLQ WCIISESLAN SIHEKGAHGY GGIWGGQKAS FHHNLLAHHT NRTPRLCGSR 

       250        260        270        280        290        300 
YTGKPEEEKV ELFNNVIYNY GSDGAYAGEG GSYNFLNNYY KPGPYSATKG SYRRLFTAYA 

       310        320        330        340        350        360 
DDGKNQNEAG VHGIFHFKGN FMDATCPSLT DKQKEALYKV NMDNTFGLIV KNDFAPEKNL 

       370        380        390        400        410        420 
LSKKAFDIAE HTSLQPAKKA YKDVLQFAGA SHRRDAVDQR IVEETRKGNY TYEGSHGSTN 

       430        440        450        460        470        480 
GMVDQPIDVG GWPEYKSEPT PTDSDGDGIP DEWEKKHNLN PNDPSDGAQY SLSKEYTNLE 

       490 
VYLNELVNHL YPADSKK

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References

[1]"A genomic view of the human-Bacteroides thetaiotaomicron symbiosis."
Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C., Hooper L.V., Gordon J.I.
Science 299:2074-2076(2003) [PubMed: 12663928] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE015928 Genomic DNA. Translation: AAO79220.1.
RefSeqNP_813026.1. NC_004663.1.

3D structure databases

ProteinModelPortalQ8A0A6.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1073767.
GenomeReviewsGene locus BT_4115 in contig AE015928_GR.
KEGGbth:BT_4115.
NMPDRfig|226186.1.peg.4113.
PATRIC21063270. VBIBacThe70966_4182.

Phylogenomic databases

HOGENOMHBG708373.
OMAPRTIVFA.
ProtClustDBCLSK376653.

Family and domain databases

InterProIPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8A0A6_BACTN
AccessionPrimary (citable) accession number: Q8A0A6
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 25, 2012
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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