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Q8A038 (Q8A038_BACTN) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Pectate lyase L EMBL AAO79288.1
Gene names
Ordered Locus Names:BT_4183
OrganismBacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Taxonomic identifier226186 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length437 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL AAO79288.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8A038 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 5BC98D111C12B8D8

FASTA43748,584
        10         20         30         40         50         60 
MKKHIGISLF FMGCFLSLSA TNYFVATNGD DSNAGTLDKP FATLQKAQSK VVPGDTVYIR 

        70         80         90        100        110        120 
GGEYRIREEQ MMGGDHLRAY VFEMNKSGTQ AKRICYTGYQ DERPIFNLAE VKPEGKRVSV 

       130        140        150        160        170        180 
FYVSGSYLHF RNFEIIKTQV TIREHTQSEC IYNQGGNHNI YENLAMHDGM AIGFYLVRGS 

       190        200        210        220        230        240 
NNLVLNCDAY NNYDPVSENG TGGNVDGFGG HPASASYTGN VFKGCRAWYN SDDGFDLIKA 

       250        260        270        280        290        300 
QAAYTIEDCW AFYNGYKPGG FVGAGDGTGF KAGGYGMRSK VKMPNEIPHH VVKNCLAYKN 

       310        320        330        340        350        360 
KNKGFYANHH LGGISWFNNT GYQNPSNFCM LNRKSPGEIV DVDGYDHIIR NNLSYKPRAA 

       370        380        390        400        410        420 
GKHIVDVNRE ECTIINNSFL PVDMTVGEDD FVSLDPAQLT LPRKADGSLP DIDFLKLKRN 

       430 
SKLYDAGTGF QFSAQNL

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References

[1]"A genomic view of the human-Bacteroides thetaiotaomicron symbiosis."
Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C., Hooper L.V., Gordon J.I.
Science 299:2074-2076(2003) [PubMed: 12663928] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE015928 Genomic DNA. Translation: AAO79288.1.
RefSeqNP_813094.1. NC_004663.1.

3D structure databases

ProteinModelPortalQ8A038.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1073644.
GenomeReviewsGene locus BT_4183 in contig AE015928_GR.
KEGGbth:BT_4183.
NMPDRfig|226186.1.peg.4181.
PATRIC21063408. VBIBacThe70966_4251.

Phylogenomic databases

HOGENOMHBG584769.
OMADSHHNYD.
ProtClustDBCLSK2520891.

Family and domain databases

InterProIPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8A038_BACTN
AccessionPrimary (citable) accession number: Q8A038
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 25, 2012
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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