Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Transcription regulator, CRP family

Gene

BT_4300

Organism
Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Enzyme and pathway databases

BioCyciBTHE226186:GJXV-4380-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription regulator, CRP familyImported
Gene namesi
Ordered Locus Names:BT_4300Imported
OrganismiBacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)Imported
Taxonomic identifieri226186 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
Proteomesi
  • UP000001414 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi53 ↔ 109Combined sources

Proteomic databases

PaxDbiQ89ZS6.

Interactioni

Protein-protein interaction databases

STRINGi226186.BT_4300.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1ZYBX-ray2.15A1-220[»]
ProteinModelPortaliQ89ZS6.
SMRiQ89ZS6. Positions 1-220.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ89ZS6.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini13 – 112100Cyclic nucleotide-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains HTH crp-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105MSR. Bacteria.
ENOG41101GZ. LUCA.
HOGENOMiHOG000291390.
InParanoidiQ89ZS6.
OMAiNYLIFRL.
OrthoDBiPOG091H03PG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiIPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00027. cNMP_binding. 1 hit.
PF13545. HTH_Crp_2. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEiPS50042. CNMP_BINDING_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q89ZS6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METMFDTLLQ LPLFQGLCHE DFTSILDKVK LHFIKHKAGE TIIKSGNPCT
60 70 80 90 100
QLCFLLKGEI SIVTNAKENI YTVIEQIEAP YLIEPQSLFG MNTNYASSYV
110 120 130 140 150
AHTEVHTVCI SKAFVLSDLF RYDIFRLNYM NIVSNRAQNL YSRLWDEPTL
160 170 180 190 200
DLKSKIIRFF LSHCEKPQGE KTFKVKMDDL ARCLDDTRLN ISKTLNELQD
210 220
NGLIELHRKE ILIPDAQKLL
Length:220
Mass (Da):25,435
Last modified:June 1, 2003 - v1
Checksum:i6D66EB11DFCD0E82
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015928 Genomic DNA. Translation: AAO79405.1.
RefSeqiNP_813211.1. NC_004663.1.
WP_008759971.1. NC_004663.1.

Genome annotation databases

EnsemblBacteriaiAAO79405; AAO79405; BT_4300.
GeneIDi1074047.
KEGGibth:BT_4300.
PATRICi21063658. VBIBacThe70966_4375.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015928 Genomic DNA. Translation: AAO79405.1.
RefSeqiNP_813211.1. NC_004663.1.
WP_008759971.1. NC_004663.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1ZYBX-ray2.15A1-220[»]
ProteinModelPortaliQ89ZS6.
SMRiQ89ZS6. Positions 1-220.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi226186.BT_4300.

Proteomic databases

PaxDbiQ89ZS6.

Protocols and materials databases

DNASUi1074047.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO79405; AAO79405; BT_4300.
GeneIDi1074047.
KEGGibth:BT_4300.
PATRICi21063658. VBIBacThe70966_4375.

Phylogenomic databases

eggNOGiENOG4105MSR. Bacteria.
ENOG41101GZ. LUCA.
HOGENOMiHOG000291390.
InParanoidiQ89ZS6.
OMAiNYLIFRL.
OrthoDBiPOG091H03PG.

Enzyme and pathway databases

BioCyciBTHE226186:GJXV-4380-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ89ZS6.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiIPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00027. cNMP_binding. 1 hit.
PF13545. HTH_Crp_2. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEiPS50042. CNMP_BINDING_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ89ZS6_BACTN
AccessioniPrimary (citable) accession number: Q89ZS6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 7, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.