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Protein

Ubiquinone biosynthesis O-methyltransferase

Gene

ubiG

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + 3-demethylubiquinone-n = S-adenosyl-L-homocysteine + ubiquinone-n.UniRule annotation
S-adenosyl-L-methionine + 3-(all-trans-polyprenyl)benzene-1,2-diol = S-adenosyl-L-homocysteine + 2-methoxy-6-(all-trans-polyprenyl)phenol.UniRule annotation

Pathwayi: ubiquinone biosynthesis

This protein is involved in the pathway ubiquinone biosynthesis, which is part of Cofactor biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway ubiquinone biosynthesis and in Cofactor biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei47 – 471S-adenosyl-L-methionineUniRule annotation
Binding sitei78 – 781S-adenosyl-L-methionine; via carbonyl oxygenUniRule annotation
Binding sitei99 – 991S-adenosyl-L-methionineUniRule annotation
Binding sitei141 – 1411S-adenosyl-L-methionine; via carbonyl oxygenUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

Ubiquinone biosynthesis

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-215-MONOMER.
UniPathwayiUPA00232.

Names & Taxonomyi

Protein namesi
Recommended name:
Ubiquinone biosynthesis O-methyltransferaseUniRule annotation
Alternative name(s):
2-polyprenyl-6-hydroxyphenol methylaseUniRule annotation (EC:2.1.1.222UniRule annotation)
3-demethylubiquinone 3-O-methyltransferaseUniRule annotation (EC:2.1.1.64UniRule annotation)
Gene namesi
Name:ubiGUniRule annotation
Ordered Locus Names:bll0214
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000002526 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 253253Ubiquinone biosynthesis O-methyltransferasePRO_0000193371Add
BLAST

Proteomic databases

PRIDEiQ89XU2.

Interactioni

Protein-protein interaction databases

STRINGi224911.bll0214.

Structurei

3D structure databases

ProteinModelPortaliQ89XU2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. UbiG/COQ3 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RFD. Bacteria.
COG2227. LUCA.
HOGENOMiHOG000278064.
InParanoidiQ89XU2.
KOiK00568.
OMAiHDWEKFV.
OrthoDBiPOG091H064Z.
PhylomeDBiQ89XU2.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_00472. UbiG. 1 hit.
InterProiIPR029063. SAM-dependent_MTases.
IPR010233. UbiG_MeTrfase.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR01983. UbiG. 1 hit.

Sequencei

Sequence statusi: Complete.

Q89XU2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQQNTSATAQ PGSTVDAAEI AKFSKLSAEW WDPKGKMAPL HRINPLRLGY
60 70 80 90 100
IRDAACRKFE RNVRSLNCLG GLRVLDIGCG AGLLCEPLSR LGAQVIGVDP
110 120 130 140 150
SQSNIAAAKL HADKSHLAID YRCTTVEEID PRERFDIVLA MEVVEHVVDV
160 170 180 190 200
GVFLKRCAAM LKPNGLMVVS TLNRNWKSFA LAIVGAEYVL RWLPRGTHEW
210 220 230 240 250
NKFVTPDELT KYLLDNRLVI TEQTGVVYSP FADKWTLSSD MDVNYMVVAE

GMV
Length:253
Mass (Da):28,120
Last modified:June 1, 2003 - v1
Checksum:iC834A007A638F774
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC45479.1.
RefSeqiNP_766854.1. NC_004463.1.
WP_011083046.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC45479; BAC45479; BAC45479.
GeneIDi1054073.
KEGGibja:bll0214.
PATRICi21183857. VBIBraJap65052_0208.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC45479.1.
RefSeqiNP_766854.1. NC_004463.1.
WP_011083046.1. NC_004463.1.

3D structure databases

ProteinModelPortaliQ89XU2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224911.bll0214.

Proteomic databases

PRIDEiQ89XU2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC45479; BAC45479; BAC45479.
GeneIDi1054073.
KEGGibja:bll0214.
PATRICi21183857. VBIBraJap65052_0208.

Phylogenomic databases

eggNOGiENOG4107RFD. Bacteria.
COG2227. LUCA.
HOGENOMiHOG000278064.
InParanoidiQ89XU2.
KOiK00568.
OMAiHDWEKFV.
OrthoDBiPOG091H064Z.
PhylomeDBiQ89XU2.

Enzyme and pathway databases

UniPathwayiUPA00232.
BioCyciBJAP224911:GJEJ-215-MONOMER.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_00472. UbiG. 1 hit.
InterProiIPR029063. SAM-dependent_MTases.
IPR010233. UbiG_MeTrfase.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR01983. UbiG. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiUBIG_BRADU
AccessioniPrimary (citable) accession number: Q89XU2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2003
Last sequence update: June 1, 2003
Last modified: September 7, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.