Q89WW1 (GCP_BRAJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp

Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein

Gene names

Name:	gcp
Ordered Locus Names:	blr0567

Organism

Bradyrhizobium japonicum

Taxonomic identifier

375 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	357 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445
Subcellular location	Cytoplasm Potential HAMAP MF_01445.
Sequence similarities	Belongs to the KAE1 / YgjD family.

Ontologies

Keywords
Biological process	tRNA processing
Cellular component	Cytoplasm
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro tRNA processing Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 357	357	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445		PRO_0000303290

Sequences

	Sequence		Length	Mass (Da)
	Q89WW1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: DCECA22F0348AFF8	FASTA	357	37,005
	10 20 30 40 50 60 MLVLGIETTC DETAAAVIER APDGIGKILS NIVRSQVDEH APFGGVVPEI AARAHVDLLD 70 80 90 100 110 120 GIIDRAMREA GIGFAQLNGV AAAAGPGLIG GVIVGLTTAK AIALVHDTPL VAVNHLEAHA 130 140 150 160 170 180 LTPRLTDGIE FPYCLFLASG GHTQIVAVTG VGQYVRLGTT VDDAIGEAFD KVAKMLGLPY 190 200 210 220 230 240 PGGPQVERAA AGGDAARFAF PRPMQGRPDA NFSLSGLKTA VRNEASRIAE ITPQDISDLC 250 260 270 280 290 300 ASFQAAVLEA TADRLNVGLR LFREQFGAPR ALVAAGGVAA NQAIRGALHD VARQAKTQLI 310 320 330 340 350 MPPPALCTDN GAMIAWAGAE RLALGMTDTM EAQPRARWLL DANATAPAGY GKTRAGF

References

[1]

"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed: 12597275] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000040 Genomic DNA. Translation: BAC45832.1.
RefSeq	NP_767207.1. NC_004463.1.
3D structure databases
ProteinModelPortal	Q89WW1.
ModBase	Search...
Protein family/group databases
MEROPS	M22.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1049567.
GenomeReviews	Gene locus blr0567 in contig BA000040_GR.
KEGG	bja:blr0567.
NMPDR	fig|224911.1.peg.567.
PATRIC	21184617. VBIBraJap65052_0584.
Phylogenomic databases
HOGENOM	HBG304663.
OMA	PAVGVHH.
PhylomeDB	Q89WW1.
ProtClustDB	PRK09604.
Enzyme and pathway databases
BioCyc	BJAP224911:BLR0567-MONOMER.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017860. Peptidase_M22_CS. IPR017861. Peptidase_M22_subgr. [Graphical view]
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
PROSITE	PS01016. GLYCOPROTEASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GCP_BRAJA

Accession

Primary (citable) accession number: Q89WW1

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 11, 2007
Last sequence update:	June 1, 2003
Last modified:	January 25, 2012
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program