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Protein

Ribosomal RNA small subunit methyltransferase G

Gene

rsmG

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(527) in 16S rRNA = S-adenosyl-L-homocysteine + N(7)-methylguanine(527) in 16S rRNA.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei123 – 1231S-adenosyl-L-methionine; via carbonyl oxygenUniRule annotation
Binding sitei128 – 1281S-adenosyl-L-methionine; via carbonyl oxygenUniRule annotation
Binding sitei193 – 1931S-adenosyl-L-methionineUniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-638-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase GUniRule annotation (EC:2.1.1.170UniRule annotation)
Alternative name(s):
16S rRNA 7-methylguanosine methyltransferaseUniRule annotation
Short name:
16S rRNA m7G methyltransferaseUniRule annotation
Gene namesi
Name:rsmGUniRule annotation
Ordered Locus Names:bll0632
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000002526 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 260260Ribosomal RNA small subunit methyltransferase GPRO_0000184227Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi224911.bll0632.

Structurei

3D structure databases

ProteinModelPortaliQ89WP6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107YTN. Bacteria.
COG0357. LUCA.
HOGENOMiHOG000221015.
InParanoidiQ89WP6.
KOiK03501.
OrthoDBiEOG6HF639.
PhylomeDBiQ89WP6.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_00074. 16SrRNA_methyltr_G.
InterProiIPR003682. rRNA_ssu_MeTfrase_G.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF02527. GidB. 1 hit.
[Graphical view]
PIRSFiPIRSF003078. GidB. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00138. rsmG_gidB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q89WP6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQRGPAGGR SSSPKPSAPG SGAGEGPDGR SAPASQKINK ASANDRSLDS
60 70 80 90 100
VIAADKIAAL KLAPVSRETE ARLDRYIALL REWQAKTNLV APSTLPHLWT
110 120 130 140 150
RHIADSLQLV DLAPTARRWA DLGSGGGFPG VVLACTMAET PGASVHLVER
160 170 180 190 200
IAKKAAFLRE AIRITTSPGV VHLAEIGDNV DRITGPVDCV TARALAPLHQ
210 220 230 240 250
LIGFAEPLMR QGAKALFPKG QDVEAELTEA AKYWNIQPQL HQSRTGDGWI
260
VELNAAERRG
Length:260
Mass (Da):27,632
Last modified:June 1, 2003 - v1
Checksum:iD47D29932427C095
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC45897.1.
RefSeqiNP_767272.1. NC_004463.1.
WP_011083459.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC45897; BAC45897; BAC45897.
GeneIDi1049422.
KEGGibja:bll0632.
PATRICi21184752. VBIBraJap65052_0650.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC45897.1.
RefSeqiNP_767272.1. NC_004463.1.
WP_011083459.1. NC_004463.1.

3D structure databases

ProteinModelPortaliQ89WP6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224911.bll0632.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC45897; BAC45897; BAC45897.
GeneIDi1049422.
KEGGibja:bll0632.
PATRICi21184752. VBIBraJap65052_0650.

Phylogenomic databases

eggNOGiENOG4107YTN. Bacteria.
COG0357. LUCA.
HOGENOMiHOG000221015.
InParanoidiQ89WP6.
KOiK03501.
OrthoDBiEOG6HF639.
PhylomeDBiQ89WP6.

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-638-MONOMER.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_00074. 16SrRNA_methyltr_G.
InterProiIPR003682. rRNA_ssu_MeTfrase_G.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF02527. GidB. 1 hit.
[Graphical view]
PIRSFiPIRSF003078. GidB. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00138. rsmG_gidB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.

Entry informationi

Entry nameiRSMG_BRADU
AccessioniPrimary (citable) accession number: Q89WP6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 23, 2004
Last sequence update: June 1, 2003
Last modified: November 11, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.