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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi14 – 19FADUniRule annotation6
Nucleotide bindingi273 – 287NADUniRule annotationAdd BLAST15

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:bll0633
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000002526 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001170681 – 626tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGAdd BLAST626

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi224911.bll0633.

Structurei

3D structure databases

ProteinModelPortaliQ89WP5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
InParanoidiQ89WP5.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.
PhylomeDBiQ89WP5.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q89WP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRPERESFDV IVIGGGHAGC EAAAASARMG AATALVTHRF STVGAMSCNP
60 70 80 90 100
AIGGLGKGHL VREVDALDGL MGRVGDAGGI QFRVLNRRKG PAVRGPRAQA
110 120 130 140 150
DRKLYAAAMQ AAIRETEGLS VIEGEADELI VVEGRVTGLR LADGREFGAG
160 170 180 190 200
SIVVTTGTFL RGLIHLGEKN WPAGRVGEAP AMGLSSSFER AGFTLGRLKT
210 220 230 240 250
GTPPRLDGTT IDWSAVEMQP GDEPPEPFSV MTDRITTPQI QCGITRTTAA
260 270 280 290 300
THEVIRANVH RSPMYSGQIK SSGPRYCPSI EDKIVRFGDR DGHQIFLEPE
310 320 330 340 350
GLDDSTVYPN GISTSLPEEV QLAILASIPG LERVKMVRPG YAIEYDHIDP
360 370 380 390 400
RELDPTLQTK RLRGLFLAGQ INGTTGYEEA AGQGIVAGLN AALAASGAAL
410 420 430 440 450
TVFDRADGYL GVMIDDLVTR GISEPYRMFT SRAEYRLTLR ADNADQRLTE
460 470 480 490 500
KGIALGCVRS ARTLHHRTKM EALNAARTLS KSLTITPNEA IKHGLSLNRD
510 520 530 540 550
GQRRSAFELM AYPDIGWSQV RAIWLELSAI DPVIATHLEI DAKYDVYLER
560 570 580 590 600
QSADVEAFRR DEGLVLSEVD YQLVPGLSNE VRAKLEKARP FTVGQAGRID
610 620
GMTPAALGIL AAYLRREARK TSKAIA
Length:626
Mass (Da):67,534
Last modified:June 1, 2003 - v1
Checksum:i79EE73DFFF5918C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC45898.1.
RefSeqiNP_767273.1. NC_004463.1.
WP_011083460.1. NZ_CP011360.1.

Genome annotation databases

EnsemblBacteriaiBAC45898; BAC45898; BAC45898.
GeneIDi1049414.
KEGGibja:bll0633.
PATRICi21184754. VBIBraJap65052_0651.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC45898.1.
RefSeqiNP_767273.1. NC_004463.1.
WP_011083460.1. NZ_CP011360.1.

3D structure databases

ProteinModelPortaliQ89WP5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224911.bll0633.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC45898; BAC45898; BAC45898.
GeneIDi1049414.
KEGGibja:bll0633.
PATRICi21184754. VBIBraJap65052_0651.

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
InParanoidiQ89WP5.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.
PhylomeDBiQ89WP5.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMNMG_BRADU
AccessioniPrimary (citable) accession number: Q89WP5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2005
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.