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Protein

Probable protein kinase UbiB

Gene

aarF

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.SAAS annotation

Pathwayi: ubiquinone biosynthesis

This protein regulates the pathway ubiquinone biosynthesis, which is part of Cofactor biosynthesis.SAAS annotation
View all proteins of this organism that are known to be involved in the pathway ubiquinone biosynthesis and in Cofactor biosynthesis.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionKinaseSAAS annotation, Transferase
Biological processUbiquinone biosynthesisSAAS annotation
LigandATP-bindingSAAS annotation, Nucleotide-binding, UbiquinoneImported

Enzyme and pathway databases

UniPathwayiUPA00232.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein kinase UbiBSAAS annotation (EC:2.7.-.-SAAS annotation)
Gene namesi
Name:aarFImported
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000002526 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei502 – 521HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membraneSAAS annotation, Cell membrane, Membrane

Interactioni

Protein-protein interaction databases

STRINGi224911.bll0760.

Structurei

3D structure databases

ProteinModelPortaliQ89WD1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini122 – 503Protein kinaseInterPro annotationAdd BLAST382

Sequence similaritiesi

Belongs to the ABC1 family. UbiB subfamily.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CNK. Bacteria.
COG0661. LUCA.
HOGENOMiHOG000264438.
InParanoidiQ89WD1.
KOiK03688.
OMAiPHNIWRL.
OrthoDBiPOG091H03ME.
PhylomeDBiQ89WD1.

Family and domain databases

InterProiView protein in InterPro
IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR010232. UbiB.
IPR004147. UbiB_dom.
PANTHERiPTHR10566:SF105. PTHR10566:SF105. 1 hit.
PfamiView protein in Pfam
PF03109. ABC1. 1 hit.
SUPFAMiSSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR01982. UbiB. 1 hit.
PROSITEiView protein in PROSITE
PS50011. PROTEIN_KINASE_DOM. 1 hit.

Sequencei

Sequence statusi: Complete.

Q89WD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MISAITHTAR LMRAAFVFAR EGVFGSVDPS LVPPPGQLAL KLARIVERRG
60 70 80 90 100
PKHGPRLSRA LTRMGPAYLK LGQFLATRPD VVGVIMARDL ESLQDRLPPF
110 120 130 140 150
SQAEAEAAIA ASLERPLKDV FASLGPPVAA ASIAQVHRGE VVRDGIRKAV
160 170 180 190 200
AVKVLRPNVA SRFRRDLSDF FYVAHKAETY SAEARRLRLI EVINTMSRSV
210 220 230 240 250
AMEMDLRLEA AAMSEMAENT GDDLDFRVPT VDWDRTTHNV LTMEWIDGIA
260 270 280 290 300
LNDHKRLAEA QVDLPDLGRK VIQSFLRHAL RDGFFHADMH PGNLFLDDTG
310 320 330 340 350
RLVAVDFGIM GRLGMKERRF LAEILLGFIT RDYRRVAEVH FEAGYVPAHH
360 370 380 390 400
SVENFAQAIR AIGEPIHNRT AEEISMARLL TLLLEVTGLF DMTTRPELIL
410 420 430 440 450
LQKTMVVVEG VARGFDPRLD IWKTADPVVR EWIERNLGPI GRVQGALTGG
460 470 480 490 500
GDLARVLMRL PDIAQRSVAV LEQLETMTRE GLRLSPESIA AMGRSEGRKN
510 520
RWRTVALWII AATFIGILIA VRNL
Length:524
Mass (Da):58,363
Last modified:June 1, 2003 - v1
Checksum:iD1A8F2EEE344F151
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC46025.1.
RefSeqiNP_767400.1. NC_004463.1.
WP_011083583.1. NZ_CP011360.1.

Genome annotation databases

EnsemblBacteriaiBAC46025; BAC46025; BAC46025.
GeneIDi1050904.
KEGGibja:bll0760.
PATRICi21185024. VBIBraJap65052_0784.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC46025.1.
RefSeqiNP_767400.1. NC_004463.1.
WP_011083583.1. NZ_CP011360.1.

3D structure databases

ProteinModelPortaliQ89WD1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224911.bll0760.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC46025; BAC46025; BAC46025.
GeneIDi1050904.
KEGGibja:bll0760.
PATRICi21185024. VBIBraJap65052_0784.

Phylogenomic databases

eggNOGiENOG4105CNK. Bacteria.
COG0661. LUCA.
HOGENOMiHOG000264438.
InParanoidiQ89WD1.
KOiK03688.
OMAiPHNIWRL.
OrthoDBiPOG091H03ME.
PhylomeDBiQ89WD1.

Enzyme and pathway databases

UniPathwayiUPA00232.

Family and domain databases

InterProiView protein in InterPro
IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR010232. UbiB.
IPR004147. UbiB_dom.
PANTHERiPTHR10566:SF105. PTHR10566:SF105. 1 hit.
PfamiView protein in Pfam
PF03109. ABC1. 1 hit.
SUPFAMiSSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR01982. UbiB. 1 hit.
PROSITEiView protein in PROSITE
PS50011. PROTEIN_KINASE_DOM. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ89WD1_BRADU
AccessioniPrimary (citable) accession number: Q89WD1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: March 15, 2017
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.