Q89VX9 (GLND_BRAJA) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 61.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: [Protein-PII] uridylyltransferase Short name=PII uridylyl-transferase EC=2.7.7.59 Alternative name(s): UTase Uridylyl-removing enzyme | ||||
| Gene names |
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| Organism | Bradyrhizobium japonicum (strain USDA 110) [Reference proteome] [HAMAP] | ||||
| Taxonomic identifier | 224911 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium › ![]() |
Protein attributes
| Sequence length | 929 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein By similarity. HAMAP-Rule MF_00277 |
| Catalytic activity | UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP-Rule MF_00277 |
| Sequence similarities | Belongs to the GlnD family. |
| Sequence caution | The sequence BAC46181.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Nitrogen fixation |
| Molecular function | Nucleotidyltransferase Transferase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | nitrogen fixation Inferred from electronic annotation. Source: HAMAP |
| Molecular_function | [protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid bindingInferred from electronic annotation. Source: InterPro metal ion bindingInferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 929 | 929 | [Protein-PII] uridylyltransferase HAMAP-Rule MF_00277 | PRO_0000192721 | |||
Sequences
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References
| [1] | "Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BA000040 Genomic DNA. Translation: BAC46181.1. Different initiation. |
| RefSeq | NP_767556.1. NC_004463.1. |
3D structure databases | |
| ProteinModelPortal | Q89VX9. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 224911.bll0916. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | BAC46181; BAC46181; BAC46181. |
| GeneID | 1049859. |
| KEGG | bja:bll0916. |
| PATRIC | 21185328. VBIBraJap65052_0935. |
Phylogenomic databases | |
| eggNOG | COG2844. |
| HOGENOM | HOG000261779. |
| KO | K00990. |
| OMA | SPKVWNA. |
| ProtClustDB | PRK05092. |
Enzyme and pathway databases | |
| BioCyc | BJAP224911:GJEJ-925-MONOMER. |
Family and domain databases | |
| Gene3D | 1.10.3210.10. 1 hit. |
| HAMAP | MF_00277. PII_uridylyl-transf. |
| InterPro | IPR002912. ACT_dom. IPR010043. GlnD_Uridyltrans. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view] |
| PANTHER | PTHR13734:SF1. PTHR13734:SF1. 1 hit. |
| Pfam | PF01842. ACT. 2 hits. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view] |
| PIRSF | PIRSF006288. PII_uridyltransf. 1 hit. |
| SMART | SM00471. HDc. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR01693. UTase_glnD. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | GLND_BRAJA | ||||||||
| Accession | Primary (citable) accession number: Q89VX9 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

Clusters with
