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Protein
Submitted name:

Bll1144 protein

Gene

bll1144

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: GO_Central

GO - Biological processi

  1. DNA ligation Source: GO_Central
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: InterPro
  4. lagging strand elongation Source: GO_Central
  5. nucleotide-excision repair Source: GO_Central
Complete GO annotation...

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-1154-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Bll1144 proteinImported
Gene namesi
Ordered Locus Names:bll1144Imported
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000002526 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. chromosome Source: GO_Central
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi224911.bll1144.

Structurei

3D structure databases

ProteinModelPortaliQ89VA3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000036007.
InParanoidiQ89VA3.
KOiK10747.
OrthoDBiEOG6Q8HXT.
PhylomeDBiQ89VA3.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q89VA3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRFAELLDR LAYEPGRNNK LRLITGYFRE VGDPDRGYAL AALTGALSFK
60 70 80 90 100
HAKPALIRDL IASRTDEVLF GLSYDYVGDL SETVALMWPK RSASSDESFP
110 120 130 140 150
GHPSPPPSPT RGEGAQQYAA LSASTTTNSD SQSDGGTSLT VPSPLAGEGQ
160 170 180 190 200
GGGYRGRDAS DALHPSNHNN PPPPTLTEVV TTLRTLGKTE LPKQLERWLD
210 220 230 240 250
ELDETGRWAL LKLVTGALRI GISARLAKTA AAALGDKDPH EVELIWPGLA
260 270 280 290 300
PPYLDLFAWL EGRGEKPVNR DPAPFRPVML AHAIDDTDFV ALDPADYIAE
310 320 330 340 350
WKWDGIRVQA VAGRDDRGHV TARLYSRTGE DITGSFPDLV PSLRLPGAID
360 370 380 390 400
GELLILREGR VQSFNVLQQR LNRKAVSPKL IKEFPIHLRA YDLLGDDEND
410 420 430 440 450
LRELPFTERR ERLETFITKL GDPRIDLSPI VPFASWEALT AARADPASAG
460 470 480 490 500
AGEDADAVEG VMLKRRDAPY LPGRPKGQWW KWKRDPHIID AVLMYAQRGH
510 520 530 540 550
GKRSSYYSDY TFGVWTEGET GDELVPVGKA YFGFTDEELL QIDRFVRRNT
560 570 580 590 600
TEKFGPVRHV VHEGDKGLVL EVAFEGLQRS PRHKSGVAMR FPRISRLRWD
610 620
KPPREADRLE TLEKMLKAEA AEVEA
Length:625
Mass (Da):69,415
Last modified:June 1, 2003 - v1
Checksum:i56BED3A80A46AD42
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC46409.1.
RefSeqiNP_767784.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC46409; BAC46409; BAC46409.
GeneIDi1049800.
KEGGibja:bll1144.
PATRICi21185828. VBIBraJap65052_1184.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC46409.1.
RefSeqiNP_767784.1. NC_004463.1.

3D structure databases

ProteinModelPortaliQ89VA3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224911.bll1144.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC46409; BAC46409; BAC46409.
GeneIDi1049800.
KEGGibja:bll1144.
PATRICi21185828. VBIBraJap65052_1184.

Phylogenomic databases

HOGENOMiHOG000036007.
InParanoidiQ89VA3.
KOiK10747.
OrthoDBiEOG6Q8HXT.
PhylomeDBiQ89VA3.

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-1154-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110Imported.

Entry informationi

Entry nameiQ89VA3_BRADU
AccessioniPrimary (citable) accession number: Q89VA3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: March 4, 2015
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.