Q89VA3 (Q89VA3_BRAJA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Bll1144 protein EMBL BAC46409.1

Gene names

Ordered Locus Names:

bll1144

Organism

Bradyrhizobium japonicum (strain USDA 110) [Reference proteome] [HAMAP]

Taxonomic identifier

224911 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium › Bradyrhizobium japonicum

Protein attributes

Sequence length	625 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro lagging strand elongation Inferred from Biological aspect of Ancestor. Source: RefGenome nucleotide-excision repair Inferred from Biological aspect of Ancestor. Source: RefGenome
Cellular_component	chromosome Inferred from Biological aspect of Ancestor. Source: RefGenome
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from Biological aspect of Ancestor. Source: RefGenome
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q89VA3 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 56BED3A80A46AD42	FASTA	625	69,415
	10 20 30 40 50 60 MNRFAELLDR LAYEPGRNNK LRLITGYFRE VGDPDRGYAL AALTGALSFK HAKPALIRDL 70 80 90 100 110 120 IASRTDEVLF GLSYDYVGDL SETVALMWPK RSASSDESFP GHPSPPPSPT RGEGAQQYAA 130 140 150 160 170 180 LSASTTTNSD SQSDGGTSLT VPSPLAGEGQ GGGYRGRDAS DALHPSNHNN PPPPTLTEVV 190 200 210 220 230 240 TTLRTLGKTE LPKQLERWLD ELDETGRWAL LKLVTGALRI GISARLAKTA AAALGDKDPH 250 260 270 280 290 300 EVELIWPGLA PPYLDLFAWL EGRGEKPVNR DPAPFRPVML AHAIDDTDFV ALDPADYIAE 310 320 330 340 350 360 WKWDGIRVQA VAGRDDRGHV TARLYSRTGE DITGSFPDLV PSLRLPGAID GELLILREGR 370 380 390 400 410 420 VQSFNVLQQR LNRKAVSPKL IKEFPIHLRA YDLLGDDEND LRELPFTERR ERLETFITKL 430 440 450 460 470 480 GDPRIDLSPI VPFASWEALT AARADPASAG AGEDADAVEG VMLKRRDAPY LPGRPKGQWW 490 500 510 520 530 540 KWKRDPHIID AVLMYAQRGH GKRSSYYSDY TFGVWTEGET GDELVPVGKA YFGFTDEELL 550 560 570 580 590 600 QIDRFVRRNT TEKFGPVRHV VHEGDKGLVL EVAFEGLQRS PRHKSGVAMR FPRISRLRWD 610 620 KPPREADRLE TLEKMLKAEA AEVEA

References

[1]

"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000040 Genomic DNA. Translation: BAC46409.1.
RefSeq	NP_767784.1. NC_004463.1.
3D structure databases
ProteinModelPortal	Q89VA3.
ModBase	Search...
Protein-protein interaction databases
STRING	224911.bll1144.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAC46409; BAC46409; BAC46409.
GeneID	1049800.
KEGG	bja:bll1144.
PATRIC	21185828. VBIBraJap65052_1184.
Phylogenomic databases
HOGENOM	HOG000036007.
KO	K01971.
OMA	KHAKPAL.
ProtClustDB	PRK09247.
Enzyme and pathway databases
BioCyc	BJAP224911:GJEJ-1154-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q89VA3_BRAJA

Accession

Primary (citable) accession number: Q89VA3

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)