Q89UG4 (URED_BRAJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Urease accessory protein UreD

Gene names

Name:	ureD
Ordered Locus Names:	blr1453

Organism

Bradyrhizobium japonicum

Taxonomic identifier

375 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	276 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter By similarity. HAMAP MF_01384
Subunit structure	UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel By similarity.
Subcellular location	Cytoplasm By similarity HAMAP MF_01384.
Sequence similarities	Belongs to the UreD family.

Ontologies

Keywords
Biological process	Nickel insertion
Cellular component	Cytoplasm
Molecular function	Chaperone
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 276	276	Urease accessory protein UreD HAMAP MF_01384		PRO_0000340414

Sequences

	Sequence		Length	Mass (Da)
	Q89UG4 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 84A56EFBE9D3C007	FASTA	276	29,475
	10 20 30 40 50 60 MRSELSVTSS IFEANRARGA VRFDVHARDG VTRRGVLHES GSLRVRFPSP EDEGLSGVFV 70 80 90 100 110 120 NTAGGVAGGD RFDVEISAAD AARLTLTTAA AEKVYRAPGP AAELNIALKV GAGAHLSWLP 130 140 150 160 170 180 QETILFDRAR VHRRFDIALD EAASLLLCEI VVFGRTAMGE RMEQGEFVDR WRLSRGGRLV 190 200 210 220 230 240 FAETVRLGGD IGAKLARSAV AKGGAAIGTA LIVPGDEALI ERIREASESF AGEVGISAWN 250 260 270 GFAMARFCAQ DAARLRADMM AVLARTGAAL PRLWLN

References

[1]

"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed: 12597275] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000040 Genomic DNA. Translation: BAC46718.1.
RefSeq	NP_768093.1. NC_004463.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1055203.
GenomeReviews	Gene locus blr1453 in contig BA000040_GR.
KEGG	bja:blr1453.
NMPDR	fig|224911.1.peg.1453.
PATRIC	21186502. VBIBraJap65052_1513.
Phylogenomic databases
HOGENOM	HBG711156.
OMA	QETILFD.
ProtClustDB	CLSK818584.
Enzyme and pathway databases
BioCyc	BJAP224911:BLR1453-MONOMER.
Family and domain databases
HAMAP	MF_01384. UreD. [Tree]
InterPro	IPR002669. UreD. [Graphical view]
KO	K03190.
Pfam	PF01774. UreD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

URED_BRAJA

Accession

Primary (citable) accession number: Q89UG4

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 10, 2008
Last sequence update:	June 1, 2003
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program