Q89T09 (Q89T09_BRAJA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-1,4-beta-xylanase EMBL BAC47506.1

Gene names

Name:	xynA EMBL BAC47506.1
Ordered Locus Names:	bll2241

Organism

Bradyrhizobium japonicum

Taxonomic identifier

375 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	355 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Biological process	Xylan degradation EMBL BAC47506.1
Molecular function	Glycosidase RuleBase RU003432 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q89T09 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: E233E56C1D5533E6	FASTA	355	39,769
	10 20 30 40 50 60 MARLDRREFL LGSAATLAAG ASASALPASK LAQRRPGFGA AATLWDLQAD PRLGEAISTY 70 80 90 100 110 120 CTQVVPVLEL KWPMLRPDAH TFAFERADAI LDFARANDLT MRGHALAWYH DIPDWTKQIK 130 140 150 160 170 180 DAKGVERAYL DHIGTVVSYY KEKLTSWDVV NEPIPDNPRS PKDRRDTFWT QHLGNNWIPL 190 200 210 220 230 240 AFRTAAAADP FVKLAINEYD IESAKDSFIA KRAAYRNLIM ELLDQGVPLH AVGLQSHLHA 250 260 270 280 290 300 ELEIDTHGLA EFVTELRSWG LEVLVTELDV DDQKLTGNPA ERDAIVAKRV DDLLTAISTS 310 320 330 340 350 GPVRSILTWG LSDRYSWING TFARADKQPN RPLPLDGEFR PKPFMDVISR FTRDV

References

[1]

"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed: 12597275] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000040 Genomic DNA. Translation: BAC47506.1.
RefSeq	NP_768881.1. NC_004463.1.
3D structure databases
HSSP	HSSP built from PDB template 1TUX based on UniProtKB P23360.
ProteinModelPortal	Q89T09.
ModBase	Search...
Protein family/group databases
CAZy	GH10. Glycoside Hydrolase Family 10.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1051728.
GenomeReviews	Gene locus bll2241 in contig BA000040_GR.
KEGG	bja:bll2241.
NMPDR	fig|224911.1.peg.2241.
PATRIC	21187812. VBIBraJap65052_2167.
Phylogenomic databases
HOGENOM	HBG626574.
OMA	MKWDAIE.
ProtClustDB	CLSK425602.
Family and domain databases
InterPro	IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR006311. TAT_signal. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01181.
Pfam	PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS51318. TAT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q89T09_BRAJA

Accession

Primary (citable) accession number: Q89T09

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)