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Protein

Glycogen synthase 1

Gene

glgA1

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei6 – 61ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-2802-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 1UniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthase 1UniRule annotation
Gene namesi
Name:glgA1UniRule annotation
Ordered Locus Names:bll2778
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000002526: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 462462Glycogen synthase 1PRO_0000188600Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi224911.bll2778.

Structurei

3D structure databases

ProteinModelPortaliQ89RJ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
InParanoidiQ89RJ4.
KOiK00703.
OrthoDBiEOG6JTC6Z.
PhylomeDBiQ89RJ4.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q89RJ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDFVRVGGL GAVSAALPRA LRPFADIRIM LPGYRDIIEQ LTHIQIVGRC
60 70 80 90 100
PSFADLPACS LGRAATKDGL PVYVLLCSQL YDRPGNPYGD ESGRDWPDND
110 120 130 140 150
IRFARFASAA AELAMGKLDK NWAADLIHAN DWQASLVPAY LAWRGAKLPS
160 170 180 190 200
ILTIHNLAYQ GLFPKDSLRR IGAPESAFHI DGLEFYDQVS FLKAGLVYAS
210 220 230 240 250
HLTTVSGTYA REITTAEFGC GLEGLLRLRS DAAELTGILN GIDESWDPRS
260 270 280 290 300
CAQLAQQFGA GDWVGKKANA DYVRKQFGLA VSRGPMFGIV ARLVHQKGID
310 320 330 340 350
LVLSAADEII DAGGQIVVTG SGEPALEQAL IDAHRRRPDA IGVAIGFNDA
360 370 380 390 400
QARRIFAGSD FTLMPSRFEP CGLSQMYAQR FGSLPIGHQT GGLAETITDG
410 420 430 440 450
ETGFLFSRPS HESFLGGVRR AFEAFMAQDQ LDSMRRSAMG RSFSWSISAD
460
SYSALYRKLA AV
Length:462
Mass (Da):50,145
Last modified:June 1, 2003 - v1
Checksum:iECEF7F7F5FE8AAD6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC48043.1.
RefSeqiNP_769418.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC48043; BAC48043; BAC48043.
GeneIDi1054079.
KEGGibja:bll2778.
PATRICi21189004. VBIBraJap65052_2760.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC48043.1.
RefSeqiNP_769418.1. NC_004463.1.

3D structure databases

ProteinModelPortaliQ89RJ4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224911.bll2778.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC48043; BAC48043; BAC48043.
GeneIDi1054079.
KEGGibja:bll2778.
PATRICi21189004. VBIBraJap65052_2760.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
InParanoidiQ89RJ4.
KOiK00703.
OrthoDBiEOG6JTC6Z.
PhylomeDBiQ89RJ4.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciBJAP224911:GJEJ-2802-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.

Entry informationi

Entry nameiGLGA1_BRADU
AccessioniPrimary (citable) accession number: Q89RJ4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: June 1, 2003
Last modified: January 7, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.