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Q89RJ4 (GLGA1_BRADU) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase 1

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase 1
Gene names
Name:glgA1
Ordered Locus Names:bll2778
OrganismBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) [Reference proteome] [HAMAP]
Taxonomic identifier224911 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium

Protein attributes

Sequence length462 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 462462Glycogen synthase 1 HAMAP-Rule MF_00484
PRO_0000188600

Sites

Binding site61ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q89RJ4 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: ECEF7F7F5FE8AAD6

FASTA46250,145
        10         20         30         40         50         60 
MDDFVRVGGL GAVSAALPRA LRPFADIRIM LPGYRDIIEQ LTHIQIVGRC PSFADLPACS 

        70         80         90        100        110        120 
LGRAATKDGL PVYVLLCSQL YDRPGNPYGD ESGRDWPDND IRFARFASAA AELAMGKLDK 

       130        140        150        160        170        180 
NWAADLIHAN DWQASLVPAY LAWRGAKLPS ILTIHNLAYQ GLFPKDSLRR IGAPESAFHI 

       190        200        210        220        230        240 
DGLEFYDQVS FLKAGLVYAS HLTTVSGTYA REITTAEFGC GLEGLLRLRS DAAELTGILN 

       250        260        270        280        290        300 
GIDESWDPRS CAQLAQQFGA GDWVGKKANA DYVRKQFGLA VSRGPMFGIV ARLVHQKGID 

       310        320        330        340        350        360 
LVLSAADEII DAGGQIVVTG SGEPALEQAL IDAHRRRPDA IGVAIGFNDA QARRIFAGSD 

       370        380        390        400        410        420 
FTLMPSRFEP CGLSQMYAQR FGSLPIGHQT GGLAETITDG ETGFLFSRPS HESFLGGVRR 

       430        440        450        460 
AFEAFMAQDQ LDSMRRSAMG RSFSWSISAD SYSALYRKLA AV 

« Hide

References

[1]"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110."
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.
DNA Res. 9:189-197(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000040 Genomic DNA. Translation: BAC48043.1.
RefSeqNP_769418.1. NC_004463.1.

3D structure databases

ProteinModelPortalQ89RJ4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224911.bll2778.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC48043; BAC48043; BAC48043.
GeneID1054079.
KEGGbja:bll2778.
PATRIC21189004. VBIBraJap65052_2760.

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVPAYLAW.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycBJAP224911:GJEJ-2802-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA1_BRADU
AccessionPrimary (citable) accession number: Q89RJ4
Entry history
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: June 1, 2003
Last modified: February 19, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways