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Q89R39 (Q89R39_BRADU) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q89R39 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: E54FD5C6A1598D83

FASTA56460,050
        10         20         30         40         50         60 
MRKNFPVTDV EYPVSDETLI VSRTDLKGKL TYFNEDFLAA AGFTSAELMG QPHNIVRHPD 

        70         80         90        100        110        120 
MPPEAFDNLW DTLKAGKPWL GAVKNRRKNG DFYWVLATAS PIRENGHVTG YTSIRTRLPA 

       130        140        150        160        170        180 
DQRKLAEEVY AAIREKKPHG YRVDAGIIRR RSLLDRFSVF TGTLKARLVT TMTLQALFML 

       190        200        210        220        230        240 
ALGIGGALST GGSTSLVLTL LALVGIAIVG FAGLATMRAI QGPMRHLNDT MLNLVQDKLD 

       250        260        270        280        290        300 
NRIVIERDDE IGEALRNLQT VQTIIRFSRD EVQAVQRRAE EQRKAGMTKL ADGFEAAIGE 

       310        320        330        340        350        360 
IVETVSSAAT ELEASASTLS STAGRAQELA TVVAAGSEEA STNVHSVASA AEEMSSSVHE 

       370        380        390        400        410        420 
IGRQVQDSTR IASEAVSQAH ATTERVSELS RAASRIGDVV ELINAIAGQT NLLALNATIE 

       430        440        450        460        470        480 
AARAGEAGRG FAVVASEVKA LAEQTAKATG EIGQQVGGIQ AATQESVGAI SEISGTIARL 

       490        500        510        520        530        540 
SEISSAIAAA VEQQRAATQE IARNVQQAAN GTQQVSSNVG DVQRGASETG SASSQVLSAA 

       550        560 
QMLSRDSNRL KLEVGKFLNS VRAA 

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References

[1]"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110."
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.
DNA Res. 9:189-197(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000040 Genomic DNA. Translation: BAC48198.1.
RefSeqNP_769573.1. NC_004463.1.

3D structure databases

ProteinModelPortalQ89R39.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224911.blr2933.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC48198; BAC48198; BAC48198.
GeneID1053630.
KEGGbja:blr2933.
PATRIC21189314. VBIBraJap65052_2915.

Phylogenomic databases

HOGENOMHOG000148079.
KOK03776.
OrthoDBEOG67HJQK.
PhylomeDBQ89R39.

Enzyme and pathway databases

BioCycBJAP224911:GJEJ-2957-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ89R39_BRADU
AccessionPrimary (citable) accession number: Q89R39
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: June 11, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)