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Q89R17

- CAPP_BRADU

UniProt

Q89R17 - CAPP_BRADU

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei164 – 1641UniRule annotation
Active sitei594 – 5941UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Carbon dioxide fixation

Keywords - Ligandi

Magnesium

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-2979-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:blr2955
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000002526: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 932932Phosphoenolpyruvate carboxylasePRO_0000166583Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi224911.blr2955.

Structurei

3D structure databases

ProteinModelPortaliQ89R17.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
InParanoidiQ89R17.
KOiK01595.
OrthoDBiEOG6TJ7T8.
PhylomeDBiQ89R17.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q89R17-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSLQTLPSDA ADSRPNRPED VQALEADARL RDDIRLLGRI LGDTVRDQEG
60 70 80 90 100
ADLFDLVERI RQTSIRFHRD EDRLARRELE QILDSMSTSE TVRIVRAFSY
110 120 130 140 150
FSHLANIAED QNNIRQMRAR TAAKIGGSGV LADTLAHAKA AGIGPDALRN
160 170 180 190 200
FFKTALVSPV LTAHPTEVRR KSTMDREMEV ASLLDRRERV ALTEDEAAAS
210 220 230 240 250
DEQLRREVLT LWQTNLLRRT KLTVLDEVAN GLSFYDYTFL REVPRLVNVL
260 270 280 290 300
EDRLEEDGDQ AASELASFLR MGSWIGGDRD GNPFVTADVM RGTLRLQSSR
310 320 330 340 350
VMQFYLNELH VLGSELSIAA HLADVSEELR TLAERSPDTS PHRSGEPYRL
360 370 380 390 400
AVSGIYARLT ATAEALEVEI TRRPVGKGRP YESVKELQAD LDVLHRSLIS
410 420 430 440 450
NNARVIARGR LRLLRRAVDC FGFHLARLDI RQNSAVHERT IAELMDAANP
460 470 480 490 500
GMSYLALGED ARISLLTNEL RSTRALVSPF VKYSDETMGE LNVFHAAAEA
510 520 530 540 550
HAKFGSDAIP QCIISMCKGM SDMLEVAVLL KEVGLVHPSG RSAINIVPLF
560 570 580 590 600
ETIEDLQASS AIMDRMLSLH DYRRLVDSRG SVQEVMLGYS DSNKDGGFVT
610 620 630 640 650
SGWELYKAEI NLVDVFERHH VRLRLFHGRG GSVGRGGGPS YDAIIAQPGG
660 670 680 690 700
AVNGQIRITE QGEIISSKYS NAEVGRNNLE ILAAATLEAS LLHPRQSAPR
710 720 730 740 750
REYLTAMDEL SSLAFRAYRG LVYETDGFVD YFWASTVINE IATLNIGSRP
760 770 780 790 800
ASRKKTRAIE DLRAIPWVFS WAQCRLMLPG WYGFGTAVEQ WIAEHPDKGM
810 820 830 840 850
PFLKELYKEW PFFRMLLSNM DMVLAKSSIA IASRYAELVP DEALREKIFG
860 870 880 890 900
RIRREWHSCI ETLLDIMGQD RLLQGNPLLE RSVRHRFPYL DPLNHVQVEL
910 920 930
LREHRAQNPD EQVLRGIQLT INGISAGLRN TG
Length:932
Mass (Da):104,591
Last modified:June 1, 2003 - v1
Checksum:iEBD4EF3DF848AFC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC48220.1.
RefSeqiNP_769595.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC48220; BAC48220; BAC48220.
GeneIDi1053583.
KEGGibja:blr2955.
PATRICi21189358. VBIBraJap65052_2937.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC48220.1 .
RefSeqi NP_769595.1. NC_004463.1.

3D structure databases

ProteinModelPortali Q89R17.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224911.blr2955.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC48220 ; BAC48220 ; BAC48220 .
GeneIDi 1053583.
KEGGi bja:blr2955.
PATRICi 21189358. VBIBraJap65052_2937.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
InParanoidi Q89R17.
KOi K01595.
OrthoDBi EOG6TJ7T8.
PhylomeDBi Q89R17.

Enzyme and pathway databases

BioCyci BJAP224911:GJEJ-2979-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.

Entry informationi

Entry nameiCAPP_BRADU
AccessioniPrimary (citable) accession number: Q89R17
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 24, 2004
Last sequence update: June 1, 2003
Last modified: November 26, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3