Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q89R17 (CAPP_BRADU) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase

Short name=PEPC
Short name=PEPCase
EC=4.1.1.31
Gene names
Name:ppc
Ordered Locus Names:blr2955
OrganismBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) [Reference proteome] [HAMAP]
Taxonomic identifier224911 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium

Protein attributes

Sequence length932 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family.

Ontologies

Keywords
   Biological processCarbon dioxide fixation
   LigandMagnesium
   Molecular functionLyase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

oxaloacetate metabolic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

tricarboxylic acid cycle

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

phosphoenolpyruvate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 932932Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595
PRO_0000166583

Sites

Active site1641 By similarity
Active site5941 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q89R17 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: EBD4EF3DF848AFC7

FASTA932104,591
        10         20         30         40         50         60 
MSLQTLPSDA ADSRPNRPED VQALEADARL RDDIRLLGRI LGDTVRDQEG ADLFDLVERI 

        70         80         90        100        110        120 
RQTSIRFHRD EDRLARRELE QILDSMSTSE TVRIVRAFSY FSHLANIAED QNNIRQMRAR 

       130        140        150        160        170        180 
TAAKIGGSGV LADTLAHAKA AGIGPDALRN FFKTALVSPV LTAHPTEVRR KSTMDREMEV 

       190        200        210        220        230        240 
ASLLDRRERV ALTEDEAAAS DEQLRREVLT LWQTNLLRRT KLTVLDEVAN GLSFYDYTFL 

       250        260        270        280        290        300 
REVPRLVNVL EDRLEEDGDQ AASELASFLR MGSWIGGDRD GNPFVTADVM RGTLRLQSSR 

       310        320        330        340        350        360 
VMQFYLNELH VLGSELSIAA HLADVSEELR TLAERSPDTS PHRSGEPYRL AVSGIYARLT 

       370        380        390        400        410        420 
ATAEALEVEI TRRPVGKGRP YESVKELQAD LDVLHRSLIS NNARVIARGR LRLLRRAVDC 

       430        440        450        460        470        480 
FGFHLARLDI RQNSAVHERT IAELMDAANP GMSYLALGED ARISLLTNEL RSTRALVSPF 

       490        500        510        520        530        540 
VKYSDETMGE LNVFHAAAEA HAKFGSDAIP QCIISMCKGM SDMLEVAVLL KEVGLVHPSG 

       550        560        570        580        590        600 
RSAINIVPLF ETIEDLQASS AIMDRMLSLH DYRRLVDSRG SVQEVMLGYS DSNKDGGFVT 

       610        620        630        640        650        660 
SGWELYKAEI NLVDVFERHH VRLRLFHGRG GSVGRGGGPS YDAIIAQPGG AVNGQIRITE 

       670        680        690        700        710        720 
QGEIISSKYS NAEVGRNNLE ILAAATLEAS LLHPRQSAPR REYLTAMDEL SSLAFRAYRG 

       730        740        750        760        770        780 
LVYETDGFVD YFWASTVINE IATLNIGSRP ASRKKTRAIE DLRAIPWVFS WAQCRLMLPG 

       790        800        810        820        830        840 
WYGFGTAVEQ WIAEHPDKGM PFLKELYKEW PFFRMLLSNM DMVLAKSSIA IASRYAELVP 

       850        860        870        880        890        900 
DEALREKIFG RIRREWHSCI ETLLDIMGQD RLLQGNPLLE RSVRHRFPYL DPLNHVQVEL 

       910        920        930 
LREHRAQNPD EQVLRGIQLT INGISAGLRN TG 

« Hide

References

[1]"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110."
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.
DNA Res. 9:189-197(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000040 Genomic DNA. Translation: BAC48220.1.
RefSeqNP_769595.1. NC_004463.1.

3D structure databases

ProteinModelPortalQ89R17.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224911.blr2955.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC48220; BAC48220; BAC48220.
GeneID1053583.
KEGGbja:blr2955.
PATRIC21189358. VBIBraJap65052_2937.

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238647.
KOK01595.
OrthoDBEOG6TJ7T8.
PhylomeDBQ89R17.

Enzyme and pathway databases

BioCycBJAP224911:GJEJ-2979-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCAPP_BRADU
AccessionPrimary (citable) accession number: Q89R17
Entry history
Integrated into UniProtKB/Swiss-Prot: May 24, 2004
Last sequence update: June 1, 2003
Last modified: July 9, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families