Q89MW3 (RS6_BRAJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S6

Gene names

Name:	rpsF
Ordered Locus Names:	bll4079

Organism

Bradyrhizobium japonicum

Taxonomic identifier

375 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	166 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP MF_00360
Sequence similarities	Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 166	166	30S ribosomal protein S6 HAMAP MF_00360		PRO_0000176737

Sequences

	Sequence		Length	Mass (Da)
	Q89MW3 [UniParc]. Last modified June 20, 2003. Version 1. Checksum: B0C5F457DE5E066A	FASTA	166	18,628
	10 20 30 40 50 60 MALYEHVFLA RQDASPQQVE ELTAQMTGIV EGLGGKVTKT ENWGVRSLTY RMNKNRKAHF 70 80 90 100 110 120 VLLNIDAPSA AIAEIERQER ISEDVIRYLS VRVEELEEGP SAMMRKADRD RERDDRGGGF 130 140 150 160 RGEREGGFRG DREGGFRGGD RDGGGFRGDR GPRRPREEAE TATDGE

References

[1]

"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed: 12597275] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000040 Genomic DNA. Translation: BAC49344.1.
RefSeq	NP_770719.1. NC_004463.1.
3D structure databases
ProteinModelPortal	Q89MW3.
ModBase	Search...
Proteomic databases
PRIDE	Q89MW3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1047445.
GenomeReviews	Gene locus bll4079 in contig BA000040_GR.
KEGG	bja:bll4079.
NMPDR	fig|224911.1.peg.4079.
PATRIC	21191672. VBIBraJap65052_4092.
Phylogenomic databases
HOGENOM	HBG747554.
OMA	ITEASPM.
PhylomeDB	Q89MW3.
ProtClustDB	PRK00453.
Enzyme and pathway databases
BioCyc	BJAP224911:BLL4079-MONOMER.
Family and domain databases
HAMAP	MF_00360. Ribosomal_S6. [Tree]
InterPro	IPR000529. Ribosomal_S6. IPR020814. Ribosomal_S6_plastid/chlpt. IPR014717. Transl_elong_EF1B/ribosomal_S6. [Graphical view]
Gene3D	G3DSA:3.30.70.60. Transl_elong_EF1B/rib_con. 1 hit.
KO	K02990.
Pfam	PF01250. Ribosomal_S6. 1 hit. [Graphical view]
SUPFAM	SSF54995. Ribosomal_S6. 1 hit.
TIGRFAMs	TIGR00166. S6. 1 hit.
PROSITE	PS01048. RIBOSOMAL_S6. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS6_BRAJA

Accession

Primary (citable) accession number: Q89MW3

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 20, 2003
Last sequence update:	June 20, 2003
Last modified:	January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program