Q89M06 (Q89M06_BRAJA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysyl-tRNA synthetase EMBL BAC49652.1

Gene names

Ordered Locus Names:

blr4387

Organism

Bradyrhizobium japonicum

Taxonomic identifier

375 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	354 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 EMBL BAC49652.1 Ligase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q89M06 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 351E13E85AEB7773	FASTA	354	38,885
	10 20 30 40 50 60 MAGDKPISPF WSPERHLDRR PFLQARGAVT GALRGFFAEQ GFMEVETSVL QVSPGNETHL 70 80 90 100 110 120 HAPRTEIVRP DGSRASRYLR TSPEFACKKL LAAGEPRIFE FARVFRDRER GDLHLPEFTM 130 140 150 160 170 180 LEWYRAGAPY DAIMADTVVV IARAAQATGI GTFSFRGRTA DPFAEPELLT VAGAFERFAG 190 200 210 220 230 240 IDLLSTISGD EGNRAALAQM AGGKIRVAGD DTWSDIFSKV LVEHVEPHLG QGRLTILFEY 250 260 270 280 290 300 PSPEAALARV KAGDPRVAER FEVYACGVEL ANGFGELTDA EEQRRRFTES MAEKQRRYGE 310 320 330 340 350 AYPLDEDFLA AVAAMPEASG VALGFDRLVM LASGATRIDQ VVWTPPANEA LSET

References

[1]

"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed: 12597275] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000040 Genomic DNA. Translation: BAC49652.1.
RefSeq	NP_771027.1. NC_004463.1.
3D structure databases
HSSP	HSSP built from PDB template 1E1O based on UniProtKB P14825.
ProteinModelPortal	Q89M06.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1052827.
GenomeReviews	Gene locus blr4387 in contig BA000040_GR.
KEGG	bja:blr4387.
NMPDR	fig|224911.1.peg.4387.
PATRIC	21192338. VBIBraJap65052_4425.
Phylogenomic databases
HOGENOM	HBG631383.
OMA	MPEASGI.
PhylomeDB	Q89M06.
ProtClustDB	CLSK864945.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. IPR018149. Lys-tRNA-synth_II_C. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PRINTS	PR00982. TRNASYNTHLYS.
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q89M06_BRAJA

Accession

Primary (citable) accession number: Q89M06

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)