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Unreviewed, UniProtKB/TrEMBL Q89LU1 (Q89LU1_BRAJA)

Last modified May 5, 2009. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Blr4452 protein EMBL BAC49717.1
Gene names
Ordered Locus Names: blr4452
OrganismBradyrhizobium japonicum [Complete proteome] [HAMAP]
Taxonomic identifier375 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium

Protein attributes

Sequence length696 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   DomainRepeat RuleBase RU003537V0
TPR repeat RuleBase RU003339V0
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionbinding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q89LU1-1 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: BD2602FBAC307428

FASTA69675,736
        10         20         30         40         50         60 
MQAVPDHFDA THLLGLSVQQ GGRLEEAQQL LERAIAIDPR SHEAHNNLAA VYVVLQKFEA 

        70         80         90        100        110        120 
ARACQEKAIA LKPNFTPALT GLGNTLLNMN LPEQAIEMYD RAIRLKPDYA DAFCNRGLAE 

       130        140        150        160        170        180 
LALRQLDRAR QSFERALLFQ PRNVEALVGK GLVNIELKNF DEAKGALEAA LAIRPGSAKI 

       190        200        210        220        230        240 
LANRGRLNFE MSRLEQAAAD FDAALAISPK LEVALQGKAQ VSLAVGNTAQ AILACTTLLE 

       250        260        270        280        290        300 
ENPRSASAMA LMSACFANQG EIAPAIELLD AALAIVTDAS LIGRKIFFLD YLSDADFAVQ 

       310        320        330        340        350        360 
QAARTQWWDA IGVKLAQRKL APRQFDPDRR IVIGYVAAEF WFHSAGFTLL PVLAHHDHSK 

       370        380        390        400        410        420 
FEIVCYSCSP VRDEVTAKFE SLADVWVEAG RLSDDQLADR IEADKVDILI DVSGHTTGNR 

       430        440        450        460        470        480 
LPVFARKPAP IQVSGFGHAT GTGLRTMDYV LADPVFIPQS ARHLLAEKVH DLPCLITIDP 

       490        500        510        520        530        540 
ILDVPPSELP MLRNGYVTFG VFNRIYKISD EAIRVWSRVM REVTGSKIII KHTMLDDPLV 

       550        560        570        580        590        600 
RDRLIARFVA HGVAEANITC LGSSPRAEHL RAFANVDISL DTFPQNGGVS TWESLYAGVP 

       610        620        630        640        650        660 
VVAKLGKGAS SRAGASIVAA VGLADWVADD DAGYAAIACK FAAQPAHLAK LRADLPAQIA 

       670        680        690 
ASPAGNVEIY TREVEAGYRQ FWRDYCAVAL ERGEVA 

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References

[1]"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110."
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.
DNA Res. 9:189-197(2002) [PubMed: 12597275] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: USDA 110.

Cross-references

Sequence databases

BA000040 Genomic DNA. Translation: BAC49717.1.
RefSeqNP_771092.1.

3D structure databases

HSSPHSSP built from PDB template 1FCH based on UniProtKB P50542.
ModBaseSearch...

Protein family/group databases

CAZyGT41. Glycosyltransferase Family 41.

Genome annotation databases

GeneID1052714.
GenomeReviewsGene locus blr4452 in contig BA000040_GR.
KEGGbja:blr4452.
NMPDRfig|224911.1.peg.4452.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ89LU1.
OMAQ89LU1. REEARTH.

Enzyme and pathway databases

BioCycBJAP224911:BLR4452-MON.

Family and domain databases

InterProIPR001440. TPR-1.
IPR011990. TPR-like_helical.
IPR013026. TPR_region.
IPR019734. TPR_repeat.
[Graphical view]
Gene3DG3DSA:1.25.40.10. TPR-like_helical. 2 hits.
PfamPF00515. TPR_1. 6 hits.
[Graphical view]
SMARTSM00028. TPR. 8 hits.
[Graphical view]
PROSITEPS50005. TPR. 7 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ89LU1_BRAJA
AccessionPrimary (citable) accession number: Q89LU1
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: May 5, 2009
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information