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Q89JQ9

- Q89JQ9_BRADU

UniProt

Q89JQ9 - Q89JQ9_BRADU

Protein
Submitted name:

Blr5213 protein

Gene

blr5213

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: RefGenome

    GO - Biological processi

    1. DNA ligation Source: RefGenome
    2. DNA recombination Source: InterPro
    3. lagging strand elongation Source: RefGenome
    4. nucleotide-excision repair Source: RefGenome

    Enzyme and pathway databases

    BioCyciBJAP224911:GJEJ-5251-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Blr5213 proteinImported
    Gene namesi
    Ordered Locus Names:blr5213Imported
    OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
    Taxonomic identifieri224911 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000002526: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. chromosome Source: RefGenome

    Interactioni

    Protein-protein interaction databases

    STRINGi224911.blr5213.

    Structurei

    3D structure databases

    ProteinModelPortaliQ89JQ9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.
    OrthoDBiEOG63NMFT.
    PhylomeDBiQ89JQ9.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q89JQ9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLEARSVDRL PRGAEWQYEP KWDDFRCLLI RSGSRLRMQS KSGRELARYF    50
    PEVAVAALNL AETQFALDGE LVIPIGKRFS FDDLLQRIHP AASRVKRLAT 100
    ETPAVFLAFD LLGCGTDDIA GLPLTKRRPA LERFAKRHFK RSEIFVLSPA 150
    SRNHTDAERW LARAGGGSDG VIAKRIDLPY QTGNREGMRI KRIRSADCVI 200
    GGFRYGERRT AGRKVVGSLL LGLYDEKGQL NHVGFTSGLK SAAKAALTDQ 250
    LETIVSDHSF TGNAPGGRSR WSTKRSTEWQ SVKPKFVVEV SYDHSTAGRF 300
    RHGTTIIRWR PDKKPRQCTM DQLEQYSVLP AALLRAPV 338
    Length:338
    Mass (Da):37,922
    Last modified:June 1, 2003 - v1
    Checksum:i8E27957946E4E1D9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000040 Genomic DNA. Translation: BAC50478.1.
    RefSeqiNP_771853.1. NC_004463.1.

    Genome annotation databases

    EnsemblBacteriaiBAC50478; BAC50478; BAC50478.
    GeneIDi1051482.
    KEGGibja:blr5213.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000040 Genomic DNA. Translation: BAC50478.1 .
    RefSeqi NP_771853.1. NC_004463.1.

    3D structure databases

    ProteinModelPortali Q89JQ9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224911.blr5213.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC50478 ; BAC50478 ; BAC50478 .
    GeneIDi 1051482.
    KEGGi bja:blr5213.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.
    OrthoDBi EOG63NMFT.
    PhylomeDBi Q89JQ9.

    Enzyme and pathway databases

    BioCyci BJAP224911:GJEJ-5251-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110Imported.

    Entry informationi

    Entry nameiQ89JQ9_BRADU
    AccessioniPrimary (citable) accession number: Q89JQ9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3