Q89JQ9 (Q89JQ9_BRAJA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Blr5213 protein EMBL BAC50478.1

Gene names

Ordered Locus Names:

blr5213

Organism

Bradyrhizobium japonicum (strain USDA 110) [Reference proteome] [HAMAP]

Taxonomic identifier

224911 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium › Bradyrhizobium japonicum

Protein attributes

Sequence length	338 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro lagging strand elongation Inferred from Biological aspect of Ancestor. Source: RefGenome nucleotide-excision repair Inferred from Biological aspect of Ancestor. Source: RefGenome
Cellular_component	chromosome Inferred from Biological aspect of Ancestor. Source: RefGenome
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from Biological aspect of Ancestor. Source: RefGenome
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q89JQ9 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 8E27957946E4E1D9	FASTA	338	37,922
	10 20 30 40 50 60 MLEARSVDRL PRGAEWQYEP KWDDFRCLLI RSGSRLRMQS KSGRELARYF PEVAVAALNL 70 80 90 100 110 120 AETQFALDGE LVIPIGKRFS FDDLLQRIHP AASRVKRLAT ETPAVFLAFD LLGCGTDDIA 130 140 150 160 170 180 GLPLTKRRPA LERFAKRHFK RSEIFVLSPA SRNHTDAERW LARAGGGSDG VIAKRIDLPY 190 200 210 220 230 240 QTGNREGMRI KRIRSADCVI GGFRYGERRT AGRKVVGSLL LGLYDEKGQL NHVGFTSGLK 250 260 270 280 290 300 SAAKAALTDQ LETIVSDHSF TGNAPGGRSR WSTKRSTEWQ SVKPKFVVEV SYDHSTAGRF 310 320 330 RHGTTIIRWR PDKKPRQCTM DQLEQYSVLP AALLRAPV

References

[1]

"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000040 Genomic DNA. Translation: BAC50478.1.
RefSeq	NP_771853.1. NC_004463.1.
3D structure databases
ProteinModelPortal	Q89JQ9.
ModBase	Search...
Protein-protein interaction databases
STRING	224911.blr5213.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAC50478; BAC50478; BAC50478.
GeneID	1051482.
KEGG	bja:blr5213.
Phylogenomic databases
HOGENOM	HOG000222508.
KO	K01971.
OMA	FRHAARF.
ProtClustDB	PRK08224.
Enzyme and pathway databases
BioCyc	BJAP224911:GJEJ-5251-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q89JQ9_BRAJA

Accession

Primary (citable) accession number: Q89JQ9

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)