Q89I88 (Q89I88_BRAJA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Aminomethyltransferase RuleBase RU003981
EC=2.1.2.10 RuleBase RU003981

Gene names

Name:	gcvT EMBL BAC51016.1
Ordered Locus Names:	blr5751

Organism

Bradyrhizobium japonicum

Taxonomic identifier

375 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	382 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The glycine cleavage system catalyzes the degradation of glycine By similarity. RuleBase RU003981
Catalytic activity	[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. RuleBase RU003981 SAAS SAAS006223
Subunit structure	The glycine cleavage system is composed of four proteins: P, T, L and H By similarity. RuleBase RU003981
Sequence similarities	Belongs to the GcvT family. RuleBase RU003980

Ontologies

Keywords
Molecular function	Aminotransferase SAAS SAAS006223 RuleBase RU003981 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	glycine catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminomethyltransferase activity Inferred from electronic annotation. Source: EC transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q89I88 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: D3110DECAE86B99E	FASTA	382	40,670
	10 20 30 40 50 60 MMLAHDQDSL KRTPLYDLHV SLGGKMVPFA GYDMPVQYPA GVLKEHLHTR SQAGLFDVSH 70 80 90 100 110 120 MGQLRLLPKS GRVEDAARAL ERLVPQDIVA IALGRQRYAQ FTNADGGILD DLMVANFGDH 130 140 150 160 170 180 LFLVVNAACK AEDEAHLRAH LSDDCVIDSL ADRALIALQG PKAEAVLAKF CAKAPSMKFM 190 200 210 220 230 240 DAGPHEVAGI KCFVSRSGYT GEDGFEISVP AADAERLAKT LLENPDVVPI GLGARDSLRL 250 260 270 280 290 300 EAGLCLYGHD IDTATTPVEA ALEWSVQKSR RSGGARAGGF PGAEKILAHF DQGAARRRVG 310 320 330 340 350 360 LRAQGRAPVR EGALLFADSA SAEPIGQVTS GGFGPSLNAP VAMGYVPTAS SALGTSLFAE 370 380 VRGQRLPMTV AAMPFVKNTY KR

References

[1]

"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed: 12597275] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000040 Genomic DNA. Translation: BAC51016.1.
RefSeq	NP_772391.1. NC_004463.1.
3D structure databases
ProteinModelPortal	Q89I88.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1049872.
GenomeReviews	Gene locus blr5751 in contig BA000040_GR.
KEGG	bja:blr5751.
NMPDR	fig|224911.1.peg.5751.
PATRIC	21195262. VBIBraJap65052_5866.
Phylogenomic databases
HOGENOM	HBG299834.
OMA	MPVQYPL.
PhylomeDB	Q89I88.
ProtClustDB	PRK13579.
Family and domain databases
InterPro	IPR013977. GCV_T_C. IPR006222. GCV_T_N. IPR006223. GcvT. [Graphical view]
KO	K00605.
PANTHER	PTHR13847:SF5. PTHR13847:SF5. 1 hit.
Pfam	PF01571. GCV_T. 1 hit. PF08669. GCV_T_C. 1 hit. [Graphical view]
PIRSF	PIRSF006487. GcvT. 1 hit.
TIGRFAMs	TIGR00528. GcvT. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q89I88_BRAJA

Accession

Primary (citable) accession number: Q89I88

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)