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Q89FH0

- Q89FH0_BRADU

UniProt

Q89FH0 - Q89FH0_BRADU

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Protein
Submitted name: Bll6730 protein
Gene
bll6730
Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sitei55 – 551Transition state stabilizerImported
Sitei182 – 1821Transition state stabilizerImported
Active sitei184 – 1841Proton donor/acceptorImported
Metal bindingi213 – 2131MagnesiumImported
Metal bindingi239 – 2391MagnesiumImported
Metal bindingi265 – 2651MagnesiumImported
Sitei292 – 2921Important for catalytic activityImported
Active sitei322 – 3221Proton donor/acceptorImported
Sitei341 – 3411Transition state stabilizerImported

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

MagnesiumImported, Metal-bindingSAAS annotationsImported

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-6781-MONOMER.
SABIO-RKQ89FH0.

Names & Taxonomyi

Protein namesi
Submitted name:
Bll6730 proteinImported
Gene namesi
Ordered Locus Names:bll6730Imported
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000002526: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi224911.bll6730.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TZZX-ray1.86A/B1-389[»]
2DW6X-ray2.30A/B/C/D1-389[»]
2DW7X-ray2.50A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P1-389[»]
ProteinModelPortaliQ89FH0.

Miscellaneous databases

EvolutionaryTraceiQ89FH0.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000257327.
OrthoDBiEOG6Q2SGK.
PhylomeDBiQ89FH0.

Family and domain databases

Gene3Di3.20.20.120. 1 hit.
3.30.390.10. 1 hit.
InterProiIPR029065. Enolase_C-like.
IPR029017. Enolase_N_like.
IPR013342. Mandelate_racemase_C.
IPR001354. MR_MLE.
[Graphical view]
PANTHERiPTHR13794. PTHR13794. 1 hit.
SMARTiSM00922. MR_MLE. 1 hit.
[Graphical view]
SUPFAMiSSF51604. SSF51604. 1 hit.
SSF54826. SSF54826. 1 hit.

Sequencei

Sequence statusi: Complete.

Q89FH0-1 [UniParc]FASTAAdd to Basket

« Hide

MSVRIVDVRE ITKPISSPIR NAYIDFTKMT TSLVAVVTDV VREGKRVVGY    50
GFNSNGRYGQ GGLIRERFAS RILEADPKKL LNEAGDNLDP DKVWAAMMIN 100
EKPGGHGERS VAVGTIDMAV WDAVAKIAGK PLFRLLAERH GVKANPRVFV 150
YAAGGYYYPG KGLSMLRGEM RGYLDRGYNV VKMKIGGAPI EEDRMRIEAV 200
LEEIGKDAQL AVDANGRFNL ETGIAYAKML RDYPLFWYEE VGDPLDYALQ 250
AALAEFYPGP MATGENLFSH QDARNLLRYG GMRPDRDWLQ FDCALSYGLC 300
EYQRTLEVLK THGWSPSRCI PHGGHQMSLN IAAGLGLGGN ESYPDLFQPY 350
GGFPDGVRVE NGHITMPDLP GIGFEGKSDL YKEMKALAE 389
Length:389
Mass (Da):43,058
Last modified:June 1, 2003 - v1
Checksum:i0FE177A59AB2F82C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000040 Genomic DNA. Translation: BAC51995.1.
RefSeqiNP_773370.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC51995; BAC51995; BAC51995.
GeneIDi1050053.
KEGGibja:bll6730.
PATRICi21197324. VBIBraJap65052_6896.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000040 Genomic DNA. Translation: BAC51995.1 .
RefSeqi NP_773370.1. NC_004463.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1TZZ X-ray 1.86 A/B 1-389 [» ]
2DW6 X-ray 2.30 A/B/C/D 1-389 [» ]
2DW7 X-ray 2.50 A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P 1-389 [» ]
ProteinModelPortali Q89FH0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224911.bll6730.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC51995 ; BAC51995 ; BAC51995 .
GeneIDi 1050053.
KEGGi bja:bll6730.
PATRICi 21197324. VBIBraJap65052_6896.

Phylogenomic databases

HOGENOMi HOG000257327.
OrthoDBi EOG6Q2SGK.
PhylomeDBi Q89FH0.

Enzyme and pathway databases

BioCyci BJAP224911:GJEJ-6781-MONOMER.
SABIO-RK Q89FH0.

Miscellaneous databases

EvolutionaryTracei Q89FH0.

Family and domain databases

Gene3Di 3.20.20.120. 1 hit.
3.30.390.10. 1 hit.
InterProi IPR029065. Enolase_C-like.
IPR029017. Enolase_N_like.
IPR013342. Mandelate_racemase_C.
IPR001354. MR_MLE.
[Graphical view ]
PANTHERi PTHR13794. PTHR13794. 1 hit.
SMARTi SM00922. MR_MLE. 1 hit.
[Graphical view ]
SUPFAMi SSF51604. SSF51604. 1 hit.
SSF54826. SSF54826. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.
  2. "Crystal structure of the protein L1841, unknown member of enolase superfamily from Bradyrhizobium japonicum."
    Fedorov A.A., Fedorov E.V., Yew W.S., Gerlt J.A., Almo S.C.
    Submitted (JUL-2004) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.86 ANGSTROMS) IN COMPLEX WITH MAGNESIUM.
  3. "Evolution of enzymatic activities in the enolase superfamily: D-tartrate dehydratase from Bradyrhizobium japonicum."
    Yew W.S., Fedorov A.A., Fedorov E.V., Wood B.M., Almo S.C., Gerlt J.A.
    Biochemistry 45:14598-14608(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) IN COMPLEX WITH MAGNESIUM, ACTIVE SITE.

Entry informationi

Entry nameiQ89FH0_BRADU
AccessioniPrimary (citable) accession number: Q89FH0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: June 11, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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