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Q89FH0 (Q89FH0_BRADU) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length389 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1841Proton donor/acceptor PDB 2DW7
Active site3221Proton donor/acceptor PDB 2DW7
Metal binding2131Magnesium PDB 1TZZ PDB 2DW6 PDB 2DW7
Metal binding2391Magnesium PDB 1TZZ PDB 2DW6 PDB 2DW7
Metal binding2651Magnesium PDB 1TZZ PDB 2DW6 PDB 2DW7
Site551Transition state stabilizer PDB 2DW7
Site1821Transition state stabilizer PDB 2DW7
Site2921Important for catalytic activity PDB 2DW7
Site3411Transition state stabilizer PDB 2DW7

Sequences

Sequence LengthMass (Da)Tools
Q89FH0 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 0FE177A59AB2F82C

FASTA38943,058
        10         20         30         40         50         60 
MSVRIVDVRE ITKPISSPIR NAYIDFTKMT TSLVAVVTDV VREGKRVVGY GFNSNGRYGQ 

        70         80         90        100        110        120 
GGLIRERFAS RILEADPKKL LNEAGDNLDP DKVWAAMMIN EKPGGHGERS VAVGTIDMAV 

       130        140        150        160        170        180 
WDAVAKIAGK PLFRLLAERH GVKANPRVFV YAAGGYYYPG KGLSMLRGEM RGYLDRGYNV 

       190        200        210        220        230        240 
VKMKIGGAPI EEDRMRIEAV LEEIGKDAQL AVDANGRFNL ETGIAYAKML RDYPLFWYEE 

       250        260        270        280        290        300 
VGDPLDYALQ AALAEFYPGP MATGENLFSH QDARNLLRYG GMRPDRDWLQ FDCALSYGLC 

       310        320        330        340        350        360 
EYQRTLEVLK THGWSPSRCI PHGGHQMSLN IAAGLGLGGN ESYPDLFQPY GGFPDGVRVE 

       370        380 
NGHITMPDLP GIGFEGKSDL YKEMKALAE 

« Hide

References

« Hide 'large scale' references
[1]"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110."
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.
DNA Res. 9:189-197(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.
[2]"Crystal structure of the protein L1841, unknown member of enolase superfamily from Bradyrhizobium japonicum."
Fedorov A.A., Fedorov E.V., Yew W.S., Gerlt J.A., Almo S.C.
Submitted (JUL-2004) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.86 ANGSTROMS) IN COMPLEX WITH MAGNESIUM.
[3]"Evolution of enzymatic activities in the enolase superfamily: D-tartrate dehydratase from Bradyrhizobium japonicum."
Yew W.S., Fedorov A.A., Fedorov E.V., Wood B.M., Almo S.C., Gerlt J.A.
Biochemistry 45:14598-14608(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) IN COMPLEX WITH MAGNESIUM, ACTIVE SITE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000040 Genomic DNA. Translation: BAC51995.1.
RefSeqNP_773370.1. NC_004463.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1TZZX-ray1.86A/B1-389[»]
2DW6X-ray2.30A/B/C/D1-389[»]
2DW7X-ray2.50A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P1-389[»]
ProteinModelPortalQ89FH0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224911.bll6730.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC51995; BAC51995; BAC51995.
GeneID1050053.
KEGGbja:bll6730.
PATRIC21197324. VBIBraJap65052_6896.

Phylogenomic databases

HOGENOMHOG000257327.
OrthoDBEOG6Q2SGK.
PhylomeDBQ89FH0.

Enzyme and pathway databases

BioCycBJAP224911:GJEJ-6781-MONOMER.
SABIO-RKQ89FH0.

Family and domain databases

Gene3D3.20.20.120. 1 hit.
3.30.390.10. 1 hit.
InterProIPR029065. Enolase_C-like.
IPR029017. Enolase_N_like.
IPR013342. Mandelate_racemase_C.
IPR001354. MR_MLE.
[Graphical view]
PANTHERPTHR13794. PTHR13794. 1 hit.
SMARTSM00922. MR_MLE. 1 hit.
[Graphical view]
SUPFAMSSF51604. SSF51604. 1 hit.
SSF54826. SSF54826. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ89FH0.

Entry information

Entry nameQ89FH0_BRADU
AccessionPrimary (citable) accession number: Q89FH0
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: June 11, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)