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Q89FD4 (Q89FD4_BRADU) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1098 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q89FD4 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: A014F50F071D4186

FASTA1,098125,251
        10         20         30         40         50         60 
MNVLSSVDTK KIEAAEVVDE LWYKDAIIYQ LHVKAFADSN NDGIGDFAGL TEKLPYLQEL 

        70         80         90        100        110        120 
GVTALWLLPF YPSPGRDDGY DIADYGSVNP DFGTMKDFKR FIQEAQKRGL RVITELVVNH 

       130        140        150        160        170        180 
TSDQHKWFKR ARRSHPGSSA RNWYVWSDTD QKYQGTRIIF TDTEKSNWTW DHEAGAFYWH 

       190        200        210        220        230        240 
RFFSHQPDLN FDNPRVVSAL IQVMKRWLDA GVDGFRLDAI PYLCEREGTS NENLPETHAI 

       250        260        270        280        290        300 
IKRLRQELDS YSKGKLLLAE ANQWPEDVQE YFGRGDECHM AYHFPLMPRI YMAIAQEDRF 

       310        320        330        340        350        360 
PITDILRQTP DIPASCQWAL FLRNHDELTL EMVTDVERDY LWTTYANDPR ARINVGIRRR 

       370        380        390        400        410        420 
LAPLMDNDRR KIELMNSLLL SFPGTPIIYY GDEIGMGDNI YLGDRNGVRT PMQWSPDRNG 

       430        440        450        460        470        480 
GFSRCDPARL YAPLIMDPVY GYESVNVEAQ SRSLSSLLSA TKRLISVRKS TLAFGRGTMT 

       490        500        510        520        530        540 
FIRPANRAVL AYVRQYHDEV ILCVANLSRA AQATELDLSP WKDRIPQEML GRTRFPPIGE 

       550        560        570        580        590        600 
LPYMITLGPY GFYWFHLMER DKSEPVTPRA VPEFETLVVP VNSTWVSLAR ERGVFEHDVL 

       610        620        630        640        650        660 
PGFLSRTRWY PEHDPKHIKP TLTSAVPFCD IGDNRPWIAF FEAAQQDAVA TRYVLPMQIE 

       670        680        690        700        710        720 
WVRFDRERFN PKALAAVRQG AREGTLLDVA TDQIFIGLFL RNLSQNLVVE ENNLRLEFKA 

       730        740        750        760        770        780 
TSRFADYTIK EPGRIRAIEQ SNSTALVDNQ YVAKIYRQLE GGTNPEIEIG HYLTEVARFA 

       790        800        810        820        830        840 
NTPALLGSVE LVEGDQRSTL GVLHAYVENQ GDGWAVTTGY LDRYIDEQRV LSAGEAPRET 

       850        860        870        880        890        900 
QEQSPYLHFV MQIGRRLAEL HVALAAARPD DLAPEPIGSA HIRHWVSDLK ARAGRVFERL 

       910        920        930        940        950        960 
ADSRDGLREA DRPLIDQLTA LRTSLPDRLN ALLPSDIDGL NIRHHGDFRL GQILIVKDDI 

       970        980        990       1000       1010       1020 
CIIDFDGDPR LPLADKRRKL PAARDVAGLI RSIDLSVNVA LGRALSGGTD EQSRLVAALS 

      1030       1040       1050       1060       1070       1080 
EWRERATTTF LSAYREAMTD RRLWPEDPQS AEGLLRFFLL DQAFDEVEYE LSHRPEGLHA 

      1090 
PLTGLLRILS NAESEAHA 

« Hide

References

[1]"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110."
Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.
DNA Res. 9:189-197(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000040 Genomic DNA. Translation: BAC52032.1.
RefSeqNP_773407.1. NC_004463.1.

3D structure databases

ProteinModelPortalQ89FD4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224911.blr6767.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAC52032; BAC52032; BAC52032.
GeneID1052211.
KEGGbja:blr6767.
PATRIC21197400. VBIBraJap65052_6934.

Phylogenomic databases

HOGENOMHOG000268420.
KOK05343.
OrthoDBEOG6RVFV2.
PhylomeDBQ89FD4.

Enzyme and pathway databases

BioCycBJAP224911:GJEJ-6818-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ89FD4_BRADU
AccessionPrimary (citable) accession number: Q89FD4
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: June 11, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)