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Q89FC8

- Q89FC8_BRADU

UniProt

Q89FC8 - Q89FC8_BRADU

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Protein
Submitted name:

Bll6773 protein

Gene

bll6773

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: RefGenome

GO - Biological processi

  1. DNA ligation Source: RefGenome
  2. DNA recombination Source: InterPro
  3. lagging strand elongation Source: RefGenome
  4. nucleotide-excision repair Source: RefGenome
Complete GO annotation...

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-6824-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Bll6773 proteinImported
Gene namesi
Ordered Locus Names:bll6773Imported
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000002526: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. chromosome Source: RefGenome
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi224911.bll6773.

Structurei

3D structure databases

ProteinModelPortaliQ89FC8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
InParanoidiQ89FC8.
KOiK01971.
OrthoDBiEOG661H49.
PhylomeDBiQ89FC8.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q89FC8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLRKLSTYRQ KRDFEKTPEP SGEAAVASSK QRRFVIQKHD ASRLHYDFRL
60 70 80 90 100
EFDGVFKSWA VTKGPSLDPH DKRLAVEVED HPLDYGDFEG TIPEGQYGGG
110 120 130 140 150
TVMLWDRGTW EADDPERGFK KGDLKFTLHG EKLHGSWVLV RMRNDRDGGK
160 170 180 190 200
RTNWLLIKHR DEYAREGEDI LAEDKSVASG RAMAQIAEGK GRAPKPFMLA
210 220 230 240 250
KGARGKADAV WQSNRVEETK GRTVAPAPRA ALKAGKTVNK AAKKSATAAT
260 270 280 290 300
NAKTVADMPD FVAPQLCTPV ERPPAGDGWC HEIKFDGYRV QLRIEDGKAT
310 320 330 340 350
LKTRKGLDWT DKFASIAKEA NSLPEAMIDG EIVALDHNGA PNFSSLQAAL
360 370 380 390 400
SDGKTEDLIF FAFDLLFAEG RDYRRLPLRE RKSRLKELLE AQKRKSNQIR
410 420 430 440 450
YVEHFESGGD AVLQSACKLE LEGVVSKKLD APYRSGRTES WTKAKCRAGH
460 470 480 490 500
EVVIGGWKTT NGKFRSLMAG VHRGDHLVFV GMVGTGFGAD TVKRIMPSLK
510 520 530 540 550
AMEAKDSPFS GKNAPKKTRD VHWLKPELVA EIEFAGFTAD GNIRQAAFKG
560 570 580 590 600
LRQDKPAEEV EAETPADTEL ARPSAGKRVP AKSGKKKDAG AAEVMGVVIS
610 620 630 640 650
KPDKELWPDG GDGEGVTKLD LARYFEAVGG WMIEHLKGRP CSILRAPDGI
660 670 680 690 700
GGETFFQRHA MQGTSNLLEL AKVSGDRKPY LQIDRVEGLA AVAQIGGLEL
710 720 730 740 750
HPWNCAPDAY DTPGRLVFDL DPAPDVGFAD VVEAAKQMRQ RLTDVGMESF
760 770 780 790 800
CKTTGGKGLH VVVPLLHGAR DKVSWKEAKA FAQGICRWMA DDEPERYLLN
810 820 830 840 850
MSKKLRNGKI FLDYLRNDRL ATAVAPLSPR ARDGATVSMP VTWAQVKGDL
860 870 880 890
DPKRYTVRTV PGLLARSKAW EGYDDAAASI KAAMKKLAGK MR
Length:892
Mass (Da):98,355
Last modified:June 1, 2003 - v1
Checksum:i994EDBA838E506B5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC52038.1.
RefSeqiNP_773413.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC52038; BAC52038; BAC52038.
GeneIDi1050858.
KEGGibja:bll6773.
PATRICi21197414. VBIBraJap65052_6941.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC52038.1 .
RefSeqi NP_773413.1. NC_004463.1.

3D structure databases

ProteinModelPortali Q89FC8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224911.bll6773.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC52038 ; BAC52038 ; BAC52038 .
GeneIDi 1050858.
KEGGi bja:bll6773.
PATRICi 21197414. VBIBraJap65052_6941.

Phylogenomic databases

HOGENOMi HOG000222509.
InParanoidi Q89FC8.
KOi K01971.
OrthoDBi EOG661H49.
PhylomeDBi Q89FC8.

Enzyme and pathway databases

BioCyci BJAP224911:GJEJ-6824-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110Imported.

Entry informationi

Entry nameiQ89FC8_BRADU
AccessioniPrimary (citable) accession number: Q89FC8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: October 29, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3