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Q89FC8

- Q89FC8_BRADU

UniProt

Q89FC8 - Q89FC8_BRADU

Protein
Submitted name:

Bll6773 protein

Gene

bll6773

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: RefGenome

    GO - Biological processi

    1. DNA ligation Source: RefGenome
    2. DNA recombination Source: InterPro
    3. lagging strand elongation Source: RefGenome
    4. nucleotide-excision repair Source: RefGenome

    Enzyme and pathway databases

    BioCyciBJAP224911:GJEJ-6824-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Bll6773 proteinImported
    Gene namesi
    Ordered Locus Names:bll6773Imported
    OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
    Taxonomic identifieri224911 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000002526: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. chromosome Source: RefGenome

    Interactioni

    Protein-protein interaction databases

    STRINGi224911.bll6773.

    Structurei

    3D structure databases

    ProteinModelPortaliQ89FC8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OrthoDBiEOG661H49.
    PhylomeDBiQ89FC8.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q89FC8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLRKLSTYRQ KRDFEKTPEP SGEAAVASSK QRRFVIQKHD ASRLHYDFRL    50
    EFDGVFKSWA VTKGPSLDPH DKRLAVEVED HPLDYGDFEG TIPEGQYGGG 100
    TVMLWDRGTW EADDPERGFK KGDLKFTLHG EKLHGSWVLV RMRNDRDGGK 150
    RTNWLLIKHR DEYAREGEDI LAEDKSVASG RAMAQIAEGK GRAPKPFMLA 200
    KGARGKADAV WQSNRVEETK GRTVAPAPRA ALKAGKTVNK AAKKSATAAT 250
    NAKTVADMPD FVAPQLCTPV ERPPAGDGWC HEIKFDGYRV QLRIEDGKAT 300
    LKTRKGLDWT DKFASIAKEA NSLPEAMIDG EIVALDHNGA PNFSSLQAAL 350
    SDGKTEDLIF FAFDLLFAEG RDYRRLPLRE RKSRLKELLE AQKRKSNQIR 400
    YVEHFESGGD AVLQSACKLE LEGVVSKKLD APYRSGRTES WTKAKCRAGH 450
    EVVIGGWKTT NGKFRSLMAG VHRGDHLVFV GMVGTGFGAD TVKRIMPSLK 500
    AMEAKDSPFS GKNAPKKTRD VHWLKPELVA EIEFAGFTAD GNIRQAAFKG 550
    LRQDKPAEEV EAETPADTEL ARPSAGKRVP AKSGKKKDAG AAEVMGVVIS 600
    KPDKELWPDG GDGEGVTKLD LARYFEAVGG WMIEHLKGRP CSILRAPDGI 650
    GGETFFQRHA MQGTSNLLEL AKVSGDRKPY LQIDRVEGLA AVAQIGGLEL 700
    HPWNCAPDAY DTPGRLVFDL DPAPDVGFAD VVEAAKQMRQ RLTDVGMESF 750
    CKTTGGKGLH VVVPLLHGAR DKVSWKEAKA FAQGICRWMA DDEPERYLLN 800
    MSKKLRNGKI FLDYLRNDRL ATAVAPLSPR ARDGATVSMP VTWAQVKGDL 850
    DPKRYTVRTV PGLLARSKAW EGYDDAAASI KAAMKKLAGK MR 892
    Length:892
    Mass (Da):98,355
    Last modified:June 1, 2003 - v1
    Checksum:i994EDBA838E506B5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000040 Genomic DNA. Translation: BAC52038.1.
    RefSeqiNP_773413.1. NC_004463.1.

    Genome annotation databases

    EnsemblBacteriaiBAC52038; BAC52038; BAC52038.
    GeneIDi1050858.
    KEGGibja:bll6773.
    PATRICi21197414. VBIBraJap65052_6941.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000040 Genomic DNA. Translation: BAC52038.1 .
    RefSeqi NP_773413.1. NC_004463.1.

    3D structure databases

    ProteinModelPortali Q89FC8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224911.bll6773.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC52038 ; BAC52038 ; BAC52038 .
    GeneIDi 1050858.
    KEGGi bja:bll6773.
    PATRICi 21197414. VBIBraJap65052_6941.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OrthoDBi EOG661H49.
    PhylomeDBi Q89FC8.

    Enzyme and pathway databases

    BioCyci BJAP224911:GJEJ-6824-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110Imported.

    Entry informationi

    Entry nameiQ89FC8_BRADU
    AccessioniPrimary (citable) accession number: Q89FC8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3