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Q89FC8

- Q89FC8_BRADU

UniProt

Q89FC8 - Q89FC8_BRADU

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Protein
Submitted name:

Bll6773 protein

Gene
bll6773
Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: RefGenome

GO - Biological processi

  1. DNA ligation Source: RefGenome
  2. DNA recombination Source: InterPro
  3. lagging strand elongation Source: RefGenome
  4. nucleotide-excision repair Source: RefGenome
Complete GO annotation...

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-6824-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Bll6773 proteinImported
Gene namesi
Ordered Locus Names:bll6773Imported
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000002526: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. chromosome Source: RefGenome
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi224911.bll6773.

Structurei

3D structure databases

ProteinModelPortaliQ89FC8.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OrthoDBiEOG661H49.
PhylomeDBiQ89FC8.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q89FC8-1 [UniParc]FASTAAdd to Basket

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MLRKLSTYRQ KRDFEKTPEP SGEAAVASSK QRRFVIQKHD ASRLHYDFRL    50
EFDGVFKSWA VTKGPSLDPH DKRLAVEVED HPLDYGDFEG TIPEGQYGGG 100
TVMLWDRGTW EADDPERGFK KGDLKFTLHG EKLHGSWVLV RMRNDRDGGK 150
RTNWLLIKHR DEYAREGEDI LAEDKSVASG RAMAQIAEGK GRAPKPFMLA 200
KGARGKADAV WQSNRVEETK GRTVAPAPRA ALKAGKTVNK AAKKSATAAT 250
NAKTVADMPD FVAPQLCTPV ERPPAGDGWC HEIKFDGYRV QLRIEDGKAT 300
LKTRKGLDWT DKFASIAKEA NSLPEAMIDG EIVALDHNGA PNFSSLQAAL 350
SDGKTEDLIF FAFDLLFAEG RDYRRLPLRE RKSRLKELLE AQKRKSNQIR 400
YVEHFESGGD AVLQSACKLE LEGVVSKKLD APYRSGRTES WTKAKCRAGH 450
EVVIGGWKTT NGKFRSLMAG VHRGDHLVFV GMVGTGFGAD TVKRIMPSLK 500
AMEAKDSPFS GKNAPKKTRD VHWLKPELVA EIEFAGFTAD GNIRQAAFKG 550
LRQDKPAEEV EAETPADTEL ARPSAGKRVP AKSGKKKDAG AAEVMGVVIS 600
KPDKELWPDG GDGEGVTKLD LARYFEAVGG WMIEHLKGRP CSILRAPDGI 650
GGETFFQRHA MQGTSNLLEL AKVSGDRKPY LQIDRVEGLA AVAQIGGLEL 700
HPWNCAPDAY DTPGRLVFDL DPAPDVGFAD VVEAAKQMRQ RLTDVGMESF 750
CKTTGGKGLH VVVPLLHGAR DKVSWKEAKA FAQGICRWMA DDEPERYLLN 800
MSKKLRNGKI FLDYLRNDRL ATAVAPLSPR ARDGATVSMP VTWAQVKGDL 850
DPKRYTVRTV PGLLARSKAW EGYDDAAASI KAAMKKLAGK MR 892
Length:892
Mass (Da):98,355
Last modified:June 1, 2003 - v1
Checksum:i994EDBA838E506B5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000040 Genomic DNA. Translation: BAC52038.1.
RefSeqiNP_773413.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC52038; BAC52038; BAC52038.
GeneIDi1050858.
KEGGibja:bll6773.
PATRICi21197414. VBIBraJap65052_6941.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000040 Genomic DNA. Translation: BAC52038.1 .
RefSeqi NP_773413.1. NC_004463.1.

3D structure databases

ProteinModelPortali Q89FC8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224911.bll6773.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC52038 ; BAC52038 ; BAC52038 .
GeneIDi 1050858.
KEGGi bja:bll6773.
PATRICi 21197414. VBIBraJap65052_6941.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OrthoDBi EOG661H49.
PhylomeDBi Q89FC8.

Enzyme and pathway databases

BioCyci BJAP224911:GJEJ-6824-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.

Entry informationi

Entry nameiQ89FC8_BRADU
AccessioniPrimary (citable) accession number: Q89FC8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: June 11, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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