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Q89F76

- Q89F76_BRADU

UniProt

Q89F76 - Q89F76_BRADU

Protein
Submitted name:

ABC transporter substrate-binding protein

Gene

bll6825

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei80 – 801Acetate 1Imported
    Binding sitei83 – 831Acetate 3Imported
    Binding sitei83 – 831Sulfate 1Imported
    Binding sitei83 – 831Sulfate 2Imported
    Binding sitei87 – 871Sulfate 1Imported
    Binding sitei87 – 871Sulfate 2Imported
    Binding sitei87 – 871Sulfate 4Imported
    Binding sitei106 – 1061Acetate 4Imported
    Binding sitei109 – 1091Acetate 6Imported
    Binding sitei109 – 1091Sulfate 1Imported
    Binding sitei109 – 1091Sulfate 2Imported
    Binding sitei113 – 1131Sulfate 1Imported
    Binding sitei113 – 1131Sulfate 2Imported
    Binding sitei132 – 1321Sulfate 6; via amide nitrogenImported
    Binding sitei135 – 1351Sulfate 7Imported
    Binding sitei145 – 1451Sulfate 8Imported
    Binding sitei151 – 1511Acetate 8Imported
    Binding sitei162 – 1621Sulfate 10Imported
    Binding sitei176 – 1761Sulfate 11Imported
    Binding sitei180 – 1801Sulfate 5Imported
    Binding sitei180 – 1801Sulfate 8Imported
    Binding sitei208 – 2081Sulfate 12Imported
    Binding sitei210 – 2101Acetate 2Imported
    Binding sitei210 – 2101Sulfate 13Imported
    Binding sitei210 – 2101Sulfate 14Imported
    Binding sitei219 – 2191Sulfate 17Imported
    Binding sitei221 – 2211Sulfate 16Imported
    Binding sitei221 – 2211Sulfate 18Imported
    Binding sitei235 – 2351Acetate 9Imported
    Binding sitei250 – 2501Sulfate 18Imported
    Binding sitei250 – 2501Sulfate 20Imported
    Binding sitei254 – 2541Sulfate 18Imported
    Binding sitei254 – 2541Sulfate 20Imported
    Binding sitei261 – 2611Acetate 10; via carbonyl oxygenImported
    Binding sitei262 – 2621Sulfate 10Imported
    Binding sitei306 – 3061Sulfate 18; via amide nitrogenImported
    Binding sitei306 – 3061Sulfate 20; via amide nitrogenImported
    Binding sitei306 – 3061Sulfate 3; via amide nitrogenImported
    Binding sitei324 – 3241Sulfate 18Imported
    Binding sitei324 – 3241Sulfate 20Imported
    Binding sitei337 – 3371Sulfate 10Imported
    Binding sitei355 – 3551Acetate 4Imported
    Binding sitei357 – 3571Acetate 2Imported
    Binding sitei357 – 3571Sulfate 13Imported
    Binding sitei357 – 3571Sulfate 14Imported
    Binding sitei363 – 3631Sulfate 21Imported

    Enzyme and pathway databases

    BioCyciBJAP224911:GJEJ-6876-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ABC transporter substrate-binding proteinImported
    Gene namesi
    Ordered Locus Names:bll6825Imported
    OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
    Taxonomic identifieri224911 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000002526: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi224911.bll6825.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4I1DX-ray2.20A/B/C/D44-364[»]
    ProteinModelPortaliQ89F76.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni342 – 3443Sulfate 21 bindingImported

    Phylogenomic databases

    HOGENOMiHOG000159582.
    KOiK02055.
    OrthoDBiEOG63JR62.
    PhylomeDBiQ89F76.

    Sequencei

    Sequence statusi: Complete.

    Q89F76-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRSVSEITLA MEEARMTTKQ NSALGYALLG AIAFGGTAAN AAEQITFVSQ    50
    GGAYQAAQTV AILDPSAKKL GITINQDSIP DAWPAIKTQV GSGKPIWDVV 100
    DTPTGYCLRG GEQGLIEKLD FSKIPNAAAM PEAYRSPYSV SYEFYSSVLA 150
    YSQKTFPKDA PNSWVDFWDV KKFPGRRALR NHPIATLEAA LMADGVAPDK 200
    LYPLDVDRAF KKLEEIKPHI TVWWTSGAQS AQLLNDGEVD MEMAWNGRVS 250
    AVAKEGAKVS FTYNQGILQS TSLCILKGAP NLETAVKFLN EAVDPVHQAN 300
    LPLHIDYGPG NPKAFETNVI KPERAAQLPS EPANAAKQAL MSYAWWSSPA 350
    GEAAEKRWAS FMQK 364
    Length:364
    Mass (Da):39,546
    Last modified:June 1, 2003 - v1
    Checksum:iAEA60626F2C3D683
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000040 Genomic DNA. Translation: BAC52090.1.
    RefSeqiNP_773465.1. NC_004463.1.

    Genome annotation databases

    EnsemblBacteriaiBAC52090; BAC52090; BAC52090.
    GeneIDi1051169.
    KEGGibja:bll6825.
    PATRICi21197525. VBIBraJap65052_6996.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000040 Genomic DNA. Translation: BAC52090.1 .
    RefSeqi NP_773465.1. NC_004463.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4I1D X-ray 2.20 A/B/C/D 44-364 [» ]
    ProteinModelPortali Q89F76.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224911.bll6825.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC52090 ; BAC52090 ; BAC52090 .
    GeneIDi 1051169.
    KEGGi bja:bll6825.
    PATRICi 21197525. VBIBraJap65052_6996.

    Phylogenomic databases

    HOGENOMi HOG000159582.
    KOi K02055.
    OrthoDBi EOG63JR62.
    PhylomeDBi Q89F76.

    Enzyme and pathway databases

    BioCyci BJAP224911:GJEJ-6876-MONOMER.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110Imported.
    2. "Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-coumaric acid and related aromatic acids."
      Tan K., Chang C., Cuff M., Osipiuk J., Landorf E., Mack J.C., Zerbs S., Joachimiak A., Collart F.R.
      Proteins 81:1709-1726(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS) OF 44-364.

    Entry informationi

    Entry nameiQ89F76_BRADU
    AccessioniPrimary (citable) accession number: Q89F76
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3