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Q89F76

- Q89F76_BRADU

UniProt

Q89F76 - Q89F76_BRADU

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Protein
Submitted name:

ABC transporter substrate-binding protein

Gene
bll6825
Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei80 – 801Acetate 1Imported
Binding sitei83 – 831Acetate 3Imported
Binding sitei83 – 831Sulfate 1Imported
Binding sitei83 – 831Sulfate 2Imported
Binding sitei87 – 871Sulfate 1Imported
Binding sitei87 – 871Sulfate 2Imported
Binding sitei87 – 871Sulfate 4Imported
Binding sitei106 – 1061Acetate 4Imported
Binding sitei109 – 1091Acetate 6Imported
Binding sitei109 – 1091Sulfate 1Imported
Binding sitei109 – 1091Sulfate 2Imported
Binding sitei113 – 1131Sulfate 1Imported
Binding sitei113 – 1131Sulfate 2Imported
Binding sitei132 – 1321Sulfate 6; via amide nitrogenImported
Binding sitei135 – 1351Sulfate 7Imported
Binding sitei145 – 1451Sulfate 8Imported
Binding sitei151 – 1511Acetate 8Imported
Binding sitei162 – 1621Sulfate 10Imported
Binding sitei176 – 1761Sulfate 11Imported
Binding sitei180 – 1801Sulfate 5Imported
Binding sitei180 – 1801Sulfate 8Imported
Binding sitei208 – 2081Sulfate 12Imported
Binding sitei210 – 2101Acetate 2Imported
Binding sitei210 – 2101Sulfate 13Imported
Binding sitei210 – 2101Sulfate 14Imported
Binding sitei219 – 2191Sulfate 17Imported
Binding sitei221 – 2211Sulfate 16Imported
Binding sitei221 – 2211Sulfate 18Imported
Binding sitei235 – 2351Acetate 9Imported
Binding sitei250 – 2501Sulfate 18Imported
Binding sitei250 – 2501Sulfate 20Imported
Binding sitei254 – 2541Sulfate 18Imported
Binding sitei254 – 2541Sulfate 20Imported
Binding sitei261 – 2611Acetate 10; via carbonyl oxygenImported
Binding sitei262 – 2621Sulfate 10Imported
Binding sitei306 – 3061Sulfate 18; via amide nitrogenImported
Binding sitei306 – 3061Sulfate 20; via amide nitrogenImported
Binding sitei306 – 3061Sulfate 3; via amide nitrogenImported
Binding sitei324 – 3241Sulfate 18Imported
Binding sitei324 – 3241Sulfate 20Imported
Binding sitei337 – 3371Sulfate 10Imported
Binding sitei355 – 3551Acetate 4Imported
Binding sitei357 – 3571Acetate 2Imported
Binding sitei357 – 3571Sulfate 13Imported
Binding sitei357 – 3571Sulfate 14Imported
Binding sitei363 – 3631Sulfate 21Imported

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-6876-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ABC transporter substrate-binding proteinImported
Gene namesi
Ordered Locus Names:bll6825Imported
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000002526: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi224911.bll6825.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4I1DX-ray2.20A/B/C/D44-364[»]
ProteinModelPortaliQ89F76.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni342 – 3443Sulfate 21 bindingImported

Phylogenomic databases

HOGENOMiHOG000159582.
KOiK02055.
OrthoDBiEOG63JR62.
PhylomeDBiQ89F76.

Sequencei

Sequence statusi: Complete.

Q89F76-1 [UniParc]FASTAAdd to Basket

« Hide

MRSVSEITLA MEEARMTTKQ NSALGYALLG AIAFGGTAAN AAEQITFVSQ    50
GGAYQAAQTV AILDPSAKKL GITINQDSIP DAWPAIKTQV GSGKPIWDVV 100
DTPTGYCLRG GEQGLIEKLD FSKIPNAAAM PEAYRSPYSV SYEFYSSVLA 150
YSQKTFPKDA PNSWVDFWDV KKFPGRRALR NHPIATLEAA LMADGVAPDK 200
LYPLDVDRAF KKLEEIKPHI TVWWTSGAQS AQLLNDGEVD MEMAWNGRVS 250
AVAKEGAKVS FTYNQGILQS TSLCILKGAP NLETAVKFLN EAVDPVHQAN 300
LPLHIDYGPG NPKAFETNVI KPERAAQLPS EPANAAKQAL MSYAWWSSPA 350
GEAAEKRWAS FMQK 364
Length:364
Mass (Da):39,546
Last modified:June 1, 2003 - v1
Checksum:iAEA60626F2C3D683
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000040 Genomic DNA. Translation: BAC52090.1.
RefSeqiNP_773465.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC52090; BAC52090; BAC52090.
GeneIDi1051169.
KEGGibja:bll6825.
PATRICi21197525. VBIBraJap65052_6996.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000040 Genomic DNA. Translation: BAC52090.1 .
RefSeqi NP_773465.1. NC_004463.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4I1D X-ray 2.20 A/B/C/D 44-364 [» ]
ProteinModelPortali Q89F76.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224911.bll6825.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC52090 ; BAC52090 ; BAC52090 .
GeneIDi 1051169.
KEGGi bja:bll6825.
PATRICi 21197525. VBIBraJap65052_6996.

Phylogenomic databases

HOGENOMi HOG000159582.
KOi K02055.
OrthoDBi EOG63JR62.
PhylomeDBi Q89F76.

Enzyme and pathway databases

BioCyci BJAP224911:GJEJ-6876-MONOMER.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110.
  2. "Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-coumaric acid and related aromatic acids."
    Tan K., Chang C., Cuff M., Osipiuk J., Landorf E., Mack J.C., Zerbs S., Joachimiak A., Collart F.R.
    Proteins 81:1709-1726(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS) OF 44-364.

Entry informationi

Entry nameiQ89F76_BRADU
AccessioniPrimary (citable) accession number: Q89F76
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 3, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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