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Q89DV1

- Q89DV1_BRADU

UniProt

Q89DV1 - Q89DV1_BRADU

Protein

Pseudouridine synthase

Gene

blr7336

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pseudouridine synthase activity Source: InterPro
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. pseudouridine synthesis Source: InterPro

    Keywords - Molecular functioni

    IsomeraseUniRule annotation

    Enzyme and pathway databases

    BioCyciBJAP224911:GJEJ-7390-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
    Gene namesi
    Ordered Locus Names:blr7336Imported
    OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
    Taxonomic identifieri224911 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000002526: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi224911.blr7336.

    Structurei

    3D structure databases

    ProteinModelPortaliQ89DV1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the pseudouridine synthase rluA family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000275919.
    KOiK06180.
    OrthoDBiEOG6P070X.
    PhylomeDBiQ89DV1.

    Family and domain databases

    Gene3Di3.10.290.10. 1 hit.
    InterProiIPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view]
    PfamiPF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view]
    SMARTiSM00363. S4. 1 hit.
    [Graphical view]
    SUPFAMiSSF55120. SSF55120. 1 hit.
    TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
    PROSITEiPS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q89DV1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MENSGSAQRL EVVVAGDEGS ARLDRVLAAR LPDLSRSRLK ALILAGAVSL    50
    KASAVRDPAY HVSHGDTIII DVPEAAPAEP KGEEIALDIV FEDDDIIVIN 100
    KPRGLVVHPA AGHETGTLVN ALIAHCGSTL SGIGGVRRPG IVHRLDKDTT 150
    GLMVVAKNDL AHASLSAQFA DHGRTGAMRR GYMAFAWGVP GRHRGTVDAP 200
    IDRHPYAREK MAVRQGGREA VTHWEILESF PGRDGKPIAA LLACELETGR 250
    THQIRVHLAH IGHPLMGDAV YGPHFKTKAN QLAPESQAAL ATLGRQALHA 300
    YLLVLEHPRT GELLHWEAPL PEDLLLLRSA LKAAL 335
    Length:335
    Mass (Da):35,940
    Last modified:June 1, 2003 - v1
    Checksum:i31E2BA7F9D99840A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000040 Genomic DNA. Translation: BAC52601.1.
    RefSeqiNP_773976.1. NC_004463.1.

    Genome annotation databases

    EnsemblBacteriaiBAC52601; BAC52601; BAC52601.
    GeneIDi1054747.
    KEGGibja:blr7336.
    PATRICi21198611. VBIBraJap65052_7537.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000040 Genomic DNA. Translation: BAC52601.1 .
    RefSeqi NP_773976.1. NC_004463.1.

    3D structure databases

    ProteinModelPortali Q89DV1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224911.blr7336.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC52601 ; BAC52601 ; BAC52601 .
    GeneIDi 1054747.
    KEGGi bja:blr7336.
    PATRICi 21198611. VBIBraJap65052_7537.

    Phylogenomic databases

    HOGENOMi HOG000275919.
    KOi K06180.
    OrthoDBi EOG6P070X.
    PhylomeDBi Q89DV1.

    Enzyme and pathway databases

    BioCyci BJAP224911:GJEJ-7390-MONOMER.

    Family and domain databases

    Gene3Di 3.10.290.10. 1 hit.
    InterProi IPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view ]
    Pfami PF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view ]
    SMARTi SM00363. S4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55120. SSF55120. 1 hit.
    TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
    PROSITEi PS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110Imported.

    Entry informationi

    Entry nameiQ89DV1_BRADU
    AccessioniPrimary (citable) accession number: Q89DV1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 74 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3