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Protein

Pseudouridine synthase

Gene

blr7336

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil.UniRule annotation

Catalytic activityi

RNA uridine = RNA pseudouridine.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotation, RNA-bindingPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciBDIA224911:G1G3J-7388-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:blr7336Imported
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000002526 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi224911.blr7336

Structurei

3D structure databases

ProteinModelPortaliQ89DV1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 94S4 RNA-bindingInterPro annotationAdd BLAST74

Sequence similaritiesi

Belongs to the pseudouridine synthase RluA family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C34 Bacteria
COG0564 LUCA
HOGENOMiHOG000275919
InParanoidiQ89DV1
KOiK06180
OMAiAHPSPGW
OrthoDBiPOG091H01TV
PhylomeDBiQ89DV1

Family and domain databases

CDDicd02869 PseudoU_synth_RluCD_like, 1 hit
cd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR006225 PsdUridine_synth_RluC/D
IPR006224 PsdUridine_synth_RluC/D_CS
IPR006145 PsdUridine_synth_RsuA/RluD
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00005 rluA_subfam, 1 hit
PROSITEiView protein in PROSITE
PS01129 PSI_RLU, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

Q89DV1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENSGSAQRL EVVVAGDEGS ARLDRVLAAR LPDLSRSRLK ALILAGAVSL
60 70 80 90 100
KASAVRDPAY HVSHGDTIII DVPEAAPAEP KGEEIALDIV FEDDDIIVIN
110 120 130 140 150
KPRGLVVHPA AGHETGTLVN ALIAHCGSTL SGIGGVRRPG IVHRLDKDTT
160 170 180 190 200
GLMVVAKNDL AHASLSAQFA DHGRTGAMRR GYMAFAWGVP GRHRGTVDAP
210 220 230 240 250
IDRHPYAREK MAVRQGGREA VTHWEILESF PGRDGKPIAA LLACELETGR
260 270 280 290 300
THQIRVHLAH IGHPLMGDAV YGPHFKTKAN QLAPESQAAL ATLGRQALHA
310 320 330
YLLVLEHPRT GELLHWEAPL PEDLLLLRSA LKAAL
Length:335
Mass (Da):35,940
Last modified:June 1, 2003 - v1
Checksum:i31E2BA7F9D99840A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA Translation: BAC52601.1
RefSeqiNP_773976.1, NC_004463.1
WP_011090071.1, NZ_CP011360.1

Genome annotation databases

EnsemblBacteriaiBAC52601; BAC52601; BAC52601
GeneIDi1054747
KEGGibja:blr7336
PATRICifig|224911.44.peg.7415

Similar proteinsi

Entry informationi

Entry nameiQ89DV1_BRADU
AccessioniPrimary (citable) accession number: Q89DV1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: May 23, 2018
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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