Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Pseudouridine synthase

Gene

blr7336

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pseudouridine synthase activity Source: InterPro
  2. RNA binding Source: InterPro

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-7390-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:blr7336Imported
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000002526: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi224911.blr7336.

Structurei

3D structure databases

ProteinModelPortaliQ89DV1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase rluA family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000275919.
InParanoidiQ89DV1.
KOiK06180.
OrthoDBiEOG6P070X.
PhylomeDBiQ89DV1.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTiSM00363. S4. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q89DV1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MENSGSAQRL EVVVAGDEGS ARLDRVLAAR LPDLSRSRLK ALILAGAVSL
60 70 80 90 100
KASAVRDPAY HVSHGDTIII DVPEAAPAEP KGEEIALDIV FEDDDIIVIN
110 120 130 140 150
KPRGLVVHPA AGHETGTLVN ALIAHCGSTL SGIGGVRRPG IVHRLDKDTT
160 170 180 190 200
GLMVVAKNDL AHASLSAQFA DHGRTGAMRR GYMAFAWGVP GRHRGTVDAP
210 220 230 240 250
IDRHPYAREK MAVRQGGREA VTHWEILESF PGRDGKPIAA LLACELETGR
260 270 280 290 300
THQIRVHLAH IGHPLMGDAV YGPHFKTKAN QLAPESQAAL ATLGRQALHA
310 320 330
YLLVLEHPRT GELLHWEAPL PEDLLLLRSA LKAAL
Length:335
Mass (Da):35,940
Last modified:June 1, 2003 - v1
Checksum:i31E2BA7F9D99840A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC52601.1.
RefSeqiNP_773976.1. NC_004463.1.

Genome annotation databases

EnsemblBacteriaiBAC52601; BAC52601; BAC52601.
GeneIDi1054747.
KEGGibja:blr7336.
PATRICi21198611. VBIBraJap65052_7537.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC52601.1.
RefSeqiNP_773976.1. NC_004463.1.

3D structure databases

ProteinModelPortaliQ89DV1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224911.blr7336.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC52601; BAC52601; BAC52601.
GeneIDi1054747.
KEGGibja:blr7336.
PATRICi21198611. VBIBraJap65052_7537.

Phylogenomic databases

HOGENOMiHOG000275919.
InParanoidiQ89DV1.
KOiK06180.
OrthoDBiEOG6P070X.
PhylomeDBiQ89DV1.

Enzyme and pathway databases

BioCyciBJAP224911:GJEJ-7390-MONOMER.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTiSM00363. S4. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110Imported.

Entry informationi

Entry nameiQ89DV1_BRADU
AccessioniPrimary (citable) accession number: Q89DV1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 7, 2015
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.