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Protein

Superoxide dismutase

Gene

chrC

Organism
Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:chrCImported
Ordered Locus Names:bll7559Imported
OrganismiBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Imported
Taxonomic identifieri224911 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000002526 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi224911.bll7559.

Structurei

3D structure databases

ProteinModelPortaliQ89D83.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini88 – 188Sod_Fe_CInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108R97. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013583.
InParanoidiQ89D83.
KOiK04564.
OMAiYEHAYHM.
OrthoDBiPOG091H03Q7.
PhylomeDBiQ89D83.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

Q89D83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTYQSKPMPF DPKSIAGISE KVLVSHYENN YVGAVKRLNA IGTQLAELDF
60 70 80 90 100
AKAPNFVING LKREELVASN SMILHEIYFD GLGGAGKPST ALAEAIARDF
110 120 130 140 150
GSMERWRAEF SAMGKAEGGG SGWVILSYSP RDKRLVNQWA ADHTTTLAGG
160 170 180 190
RPVLVLDMYE HAYHMDYGAA AAKYVDIYME AIKWDNAATL YDQYRREA
Length:198
Mass (Da):21,922
Last modified:June 1, 2003 - v1
Checksum:i4AC37C17EF1D2733
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC52824.1.
RefSeqiNP_774199.1. NC_004463.1.
WP_011090288.1. NZ_CP011360.1.

Genome annotation databases

EnsemblBacteriaiBAC52824; BAC52824; BAC52824.
GeneIDi1047354.
KEGGibja:bll7559.
PATRICi21199098. VBIBraJap65052_7778.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000040 Genomic DNA. Translation: BAC52824.1.
RefSeqiNP_774199.1. NC_004463.1.
WP_011090288.1. NZ_CP011360.1.

3D structure databases

ProteinModelPortaliQ89D83.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224911.bll7559.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC52824; BAC52824; BAC52824.
GeneIDi1047354.
KEGGibja:bll7559.
PATRICi21199098. VBIBraJap65052_7778.

Phylogenomic databases

eggNOGiENOG4108R97. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013583.
InParanoidiQ89D83.
KOiK04564.
OMAiYEHAYHM.
OrthoDBiPOG091H03Q7.
PhylomeDBiQ89D83.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ89D83_BRADU
AccessioniPrimary (citable) accession number: Q89D83
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.