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Protein

Protein Tat

Gene

tat

Organism
Simian immunodeficiency virus (SIV)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ActivatorUniRule annotation

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

RNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TatUniRule annotation
Gene namesi
Name:tatImported
OrganismiSimian immunodeficiency virus (SIV)Imported
Taxonomic identifieri11723 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus group
Virus hostiPan troglodytes (Chimpanzee) [TaxID: 9598]

Subcellular locationi

  • Host nucleushost nucleolus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host nucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the lentiviruses Tat family.UniRule annotation

Family and domain databases

Gene3Di4.10.20.10. 1 hit.
InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]
PRINTSiPR00055. HIVTATDOMAIN.

Sequencei

Sequence statusi: Complete.

Q89725-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDMETPLKE QENSLESCRE HSSSISEVDV PTPESANLEE EILYQLFRPL
60 70 80 90 100
ETCYNKCYCK RCCYHCQHCF LKKGLGICYE QHRRRTPKKT KANPLPASNK
110 120 130
SLSTRARNRQ PKKEKKETVE TEVATDLGLG R
Length:131
Mass (Da):15,180
Last modified:November 1, 1996 - v1
Checksum:iCF95756386B325D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U04984 Unassigned DNA. Translation: AAA18060.1.
U04990 Unassigned DNA. Translation: AAA18088.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U04984 Unassigned DNA. Translation: AAA18060.1.
U04990 Unassigned DNA. Translation: AAA18088.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di4.10.20.10. 1 hit.
InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]
PRINTSiPR00055. HIVTATDOMAIN.
ProtoNetiSearch...

Publicationsi

  1. "Spontaneous substitutions in the vicinity of the V3 analog affect cell tropism and pathogenicity of simian immunodeficiency virus."
    Hirsch V.M., Martin J.E., Dapolito G., Elkins W.R., London W.T., Goldstein S., Johnson P.R.
    J. Virol. 68:2649-2661(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SIVsm62Imported.
    Tissue: SpleenImported.

Entry informationi

Entry nameiQ89725_SIV
AccessioniPrimary (citable) accession number: Q89725
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.