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Protein

Gag polyprotein

Gene

gag

Organism
Human immunodeficiency virus 1
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processHost-virus interaction, Viral budding, Viral budding via the host ESCRT complexesSAAS annotation, Viral release from host cell

Names & Taxonomyi

Protein namesi
Recommended name:
Gag polyproteinSAAS annotation
Gene namesi
Name:gagImported
OrganismiHuman immunodeficiency virus 1Imported
Taxonomic identifieri11676 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus group
Virus hostiHomo sapiens (Human) [TaxID: 9606]

Subcellular locationi

  • Virion SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

VirionSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ89503
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 132Gag_p17InterPro annotationAdd BLAST131

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili94 – 124Sequence analysisAdd BLAST31

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.10.150.90, 1 hit
1.10.375.10, 1 hit
InterProiView protein in InterPro
IPR000721 Gag_p24
IPR000071 Lentvrl_matrix_N
IPR012344 Matrix_HIV/RSV_N
IPR008919 Retrov_capsid_N
IPR010999 Retrovr_matrix
PfamiView protein in Pfam
PF00540 Gag_p17, 1 hit
PF00607 Gag_p24, 1 hit
PRINTSiPR00234 HIV1MATRIX
SUPFAMiSSF47836 SSF47836, 1 hit
SSF47943 SSF47943, 1 hit

Sequencei

Sequence statusi: Complete.

Q89503-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGARASILSG GKLDAWKRIR LRPGGKKKYQ IKHIVWASRK LEKFALNPGL
60 70 80 90 100
LKTAEGCQQI MEQLQSALKT GSEELKSLFN TVATLYCVHQ KINVKDTKEA
110 120 130 140 150
LDKIEEIQNK SKQKTQQAAA ATENSSKVSQ NYPIVQNAQG QMVHQAMSPR
160 170 180 190 200
TLNAWVKVIE EKGFSPEVIP MFSALSEGAT PQNLNIMLNI VKGHQAAMQM
210 220 230 240 250
LKDTINEEAA EWDRIHPVQA GPIPPSQIRE PRGSDIAGTT STTQEQIGWM
260
TGNPPIPVGK IYKK
Length:264
Mass (Da):29,207
Last modified:November 1, 1996 - v1
Checksum:i1F2E4947452D551F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U43172 Genomic DNA Translation: AAA85207.1

Similar proteinsi

Entry informationi

Entry nameiQ89503_9HIV1
AccessioniPrimary (citable) accession number: Q89503
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 25, 2018
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health