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Q890J1

- GLGB_LACPL

UniProt

Q890J1 - GLGB_LACPL

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei305 – 3051NucleophileUniRule annotation
Active sitei357 – 3571Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciLPLA220668-WGS:GSPK-17-MONOMER.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:lp_0020
OrganismiLactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Taxonomic identifieri220668 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000000432: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6346341,4-alpha-glucan branching enzyme GlgBPRO_0000188712Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi220668.lp_0020.

Structurei

3D structure databases

ProteinModelPortaliQ890J1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiISEGRHE.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q890J1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MVKQTTEMND ASYLFNTGAG FNSQDYLGCH LAASGRAVFR VWAPHAKAVG
60 70 80 90 100
VVGDFNDWQP SALKLLGATG IWQGQVPNVH AGQLYKFQIT TPTGQVQLKI
110 120 130 140 150
DPFAQQFERK PGDAAVVVEP MTMRWHDSLW LARRKKSRAA NRPINIYEVH
160 170 180 190 200
LGSWRRHLDG SYYTYAELAA ELIPYVKQRG YTHIELMPVM EHLLDASWGY
210 220 230 240 250
QQLGYFAPTS RFGKRDSFLS FVDQCHQANI GVFVDWVPGH FIRNYDALYQ
260 270 280 290 300
YDGTPTFEYA DPERANNRRW GAWNFDLGKT QVQSFLISSA EYWLDQCHLD
310 320 330 340 350
GLRVDAVSNM LYCDYDEGRE GQVNQYGDNR NLEGIAFLQK LNTTVLTHHP
360 370 380 390 400
DILMIAEESS AYPQVTGSVA NGGLGFNYKW NMGWMHDTLD FFMMDPLYRH
410 420 430 440 450
DHFNLLTFAF VYMFDERFIL PFSHDEVVHG KKSLMHKMSG DRYNQFANLR
460 470 480 490 500
TMLTYMAAFP GKQLNFMGSE WGQFLEWRDW SALEWVDLKD DLNHRMQQFT
510 520 530 540 550
TQLNAVYRHN RPLWEQDHDP AGIIYTHTDD PDSSTMGFIR QAKRKYSFVV
560 570 580 590 600
AAFNFVPVER QDYRIGVPYR GRYELLLNTE AQAFGGTWTK LETTFTAVDK
610 620 630
PYRGQPASFT VTLPAMGALL IRPVKVIGGV KHAR
Length:634
Mass (Da):72,981
Last modified:June 1, 2003 - v1
Checksum:i485346A5038C47EF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL935263 Genomic DNA. Translation: CCC77596.1.
RefSeqiYP_004888110.1. NC_004567.2.

Genome annotation databases

EnsemblBacteriaiCCC77596; CCC77596; lp_0020.
GeneIDi1061293.
KEGGilpl:lp_0020.
PATRICi22246661. VBILacPla27411_0018.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL935263 Genomic DNA. Translation: CCC77596.1 .
RefSeqi YP_004888110.1. NC_004567.2.

3D structure databases

ProteinModelPortali Q890J1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 220668.lp_0020.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCC77596 ; CCC77596 ; lp_0020 .
GeneIDi 1061293.
KEGGi lpl:lp_0020.
PATRICi 22246661. VBILacPla27411_0018.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi ISEGRHE.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci LPLA220668-WGS:GSPK-17-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-793 / NCIMB 8826 / WCFS1.

Entry informationi

Entry nameiGLGB_LACPL
AccessioniPrimary (citable) accession number: Q890J1
Secondary accession number(s): F9US49
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: June 1, 2003
Last modified: October 29, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3