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Q890J1

- GLGB_LACPL

UniProt

Q890J1 - GLGB_LACPL

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei305 – 3051NucleophileUniRule annotation
    Active sitei357 – 3571Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    BioCyciLPLA220668-WGS:GSPK-17-MONOMER.
    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
    Alpha-(1->4)-glucan branching enzymeUniRule annotation
    Glycogen branching enzymeUniRule annotation
    Short name:
    BEUniRule annotation
    Gene namesi
    Name:glgBUniRule annotation
    Ordered Locus Names:lp_0020
    OrganismiLactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
    Taxonomic identifieri220668 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
    ProteomesiUP000000432: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 6346341,4-alpha-glucan branching enzyme GlgBPRO_0000188712Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi220668.lp_0020.

    Structurei

    3D structure databases

    ProteinModelPortaliQ890J1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiISEGRHE.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q890J1-1 [UniParc]FASTAAdd to Basket

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    MVKQTTEMND ASYLFNTGAG FNSQDYLGCH LAASGRAVFR VWAPHAKAVG    50
    VVGDFNDWQP SALKLLGATG IWQGQVPNVH AGQLYKFQIT TPTGQVQLKI 100
    DPFAQQFERK PGDAAVVVEP MTMRWHDSLW LARRKKSRAA NRPINIYEVH 150
    LGSWRRHLDG SYYTYAELAA ELIPYVKQRG YTHIELMPVM EHLLDASWGY 200
    QQLGYFAPTS RFGKRDSFLS FVDQCHQANI GVFVDWVPGH FIRNYDALYQ 250
    YDGTPTFEYA DPERANNRRW GAWNFDLGKT QVQSFLISSA EYWLDQCHLD 300
    GLRVDAVSNM LYCDYDEGRE GQVNQYGDNR NLEGIAFLQK LNTTVLTHHP 350
    DILMIAEESS AYPQVTGSVA NGGLGFNYKW NMGWMHDTLD FFMMDPLYRH 400
    DHFNLLTFAF VYMFDERFIL PFSHDEVVHG KKSLMHKMSG DRYNQFANLR 450
    TMLTYMAAFP GKQLNFMGSE WGQFLEWRDW SALEWVDLKD DLNHRMQQFT 500
    TQLNAVYRHN RPLWEQDHDP AGIIYTHTDD PDSSTMGFIR QAKRKYSFVV 550
    AAFNFVPVER QDYRIGVPYR GRYELLLNTE AQAFGGTWTK LETTFTAVDK 600
    PYRGQPASFT VTLPAMGALL IRPVKVIGGV KHAR 634
    Length:634
    Mass (Da):72,981
    Last modified:June 1, 2003 - v1
    Checksum:i485346A5038C47EF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL935263 Genomic DNA. Translation: CCC77596.1.
    RefSeqiWP_011100852.1. NC_004567.2.
    YP_004888110.1. NC_004567.2.

    Genome annotation databases

    EnsemblBacteriaiCCC77596; CCC77596; lp_0020.
    GeneIDi1061293.
    KEGGilpl:lp_0020.
    PATRICi22246661. VBILacPla27411_0018.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL935263 Genomic DNA. Translation: CCC77596.1 .
    RefSeqi WP_011100852.1. NC_004567.2.
    YP_004888110.1. NC_004567.2.

    3D structure databases

    ProteinModelPortali Q890J1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 220668.lp_0020.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCC77596 ; CCC77596 ; lp_0020 .
    GeneIDi 1061293.
    KEGGi lpl:lp_0020.
    PATRICi 22246661. VBILacPla27411_0018.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi ISEGRHE.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci LPLA220668-WGS:GSPK-17-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-793 / NCIMB 8826 / WCFS1.

    Entry informationi

    Entry nameiGLGB_LACPL
    AccessioniPrimary (citable) accession number: Q890J1
    Secondary accession number(s): F9US49
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 15, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 81 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3