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Protein

Glycogen synthase

Gene

glgA

Organism
Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei16 – 161ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciLPLA220668-WGS:GSPK-20-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:lp_0023
OrganismiLactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Taxonomic identifieri220668 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000000432 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 479479Glycogen synthasePRO_0000188622Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi220668.lp_0023.

Structurei

3D structure databases

ProteinModelPortaliQ890I8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPFWRPDI.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q890I8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRVLFAAAE AAPFYKTGGL GDVSMALPRA LQAEGIETRV VIPYYPHQMP
60 70 80 90 100
TEYQQQLVPV THFTVQVGEH AMYCGIKTLT VAHVQYYLID NLDYFGREGL
110 120 130 140 150
YGYWDDGARF AFFQMAVCEM MEQIDYIPDI LQLNDWHTAF IPVLLAEKYY
160 170 180 190 200
WIEAYRDIKT VLTIHNLQFQ GVYDPIILDS LFRIGTETYT EAGVAFYDQV
210 220 230 240 250
NWLKGGINFA DAVNTVSPTY AQEIQTPAFG ERLDGVLRAN RYKLSGILNG
260 270 280 290 300
IDMQLYDPAT DLALTANYSA KDLKPKRQNK RALQRRLGLP VKNMPVLAVV
310 320 330 340 350
SRLTKQKGID LLLDALNPFL QQQDVQLIVL GTGDPALERA LRTYQSAYPQ
360 370 380 390 400
KVVAAIQFDT QLAQQIYAAS DIFLMPSAFE PCGLSQMMAM HYGTLPIVHA
410 420 430 440 450
VGGLRDTVIP YNRYTGQGTG FSFDDYQPAV LRKIMILAVT LYRQHPLVWR
460 470
QLQHQAMTCD FGWEHSAQQY RATYQKLMR
Length:479
Mass (Da):54,400
Last modified:June 1, 2003 - v1
Checksum:iFC3B39BCE97EC8E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL935263 Genomic DNA. Translation: CCC77599.1.
RefSeqiYP_004888113.1. NC_004567.2.

Genome annotation databases

EnsemblBacteriaiCCC77599; CCC77599; lp_0023.
GeneIDi1061257.
KEGGilpl:lp_0023.
PATRICi22246667. VBILacPla27411_0021.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL935263 Genomic DNA. Translation: CCC77599.1.
RefSeqiYP_004888113.1. NC_004567.2.

3D structure databases

ProteinModelPortaliQ890I8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi220668.lp_0023.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCC77599; CCC77599; lp_0023.
GeneIDi1061257.
KEGGilpl:lp_0023.
PATRICi22246667. VBILacPla27411_0021.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPFWRPDI.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciLPLA220668-WGS:GSPK-20-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-793 / NCIMB 8826 / WCFS1.

Entry informationi

Entry nameiGLGA_LACPL
AccessioniPrimary (citable) accession number: Q890I8
Secondary accession number(s): F9US52
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2003
Last sequence update: June 1, 2003
Last modified: March 4, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.