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Q88X53

- SYR_LACPL

UniProt

Q88X53 - SYR_LACPL

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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

  1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
  2. ATP binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciLPLA220668-WGS:GSPK-1196-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:lp_1391
OrganismiLactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Taxonomic identifieri220668 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000000432: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 562562Arginine--tRNA ligasePRO_0000151568Add
BLAST

Proteomic databases

PRIDEiQ88X53.

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi220668.lp_1391.

Structurei

3D structure databases

ProteinModelPortaliQ88X53.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi121 – 13111"HIGH" regionAdd
BLAST

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0018.
HOGENOMiHOG000247211.
KOiK01887.
OMAiYVKFHDE.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.

Sequencei

Sequence statusi: Complete.

Q88X53-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDYKQLVAAA LAPALPDLTQ EAILDKIEQP KTSKQGDLAF PTFTLAKTLH
60 70 80 90 100
KAPQMIASDI VEKVDSSDFE KVVAMGPYVN FFFKKDAFAA DILNQVLSNG
110 120 130 140 150
GHFGDAKLGE AGQVPIDMSS PNIAKPISMG HLRSTVIGNS LANILSKLDY
160 170 180 190 200
QPVKINHLGD WGTQFGKLIT AYKMWGSEAE VKADPINNLL KYYVRFHKED
210 220 230 240 250
VDHPEMDDEA REWFKKLENG DEEATHLWSW FRSESLKAFK KIYQRLDIDF
260 270 280 290 300
DSFKGEAFYN DKMQEVVDIL EDKHLLQESQ GAEVVDLSKY DLNPALIKKS
310 320 330 340 350
DGATLYITRD LAAAIYRKRT YDFVQSLYVV GNEQTNHFKQ LKAVLTEMGF
360 370 380 390 400
DWADQIHHIP FGLITSGGKK LSTRSGRVIL LDKVLDDAVA LAHEQIEAKN
410 420 430 440 450
PDLPNKDEVA DAVGIGAVVF HDLKNERMNS FDFNLEEVVR FEGETGPYVQ
460 470 480 490 500
YAHARAESIL RKAGSPEIAA TEQTLSDPAA WDTLKLLSEF PATVVRASTE
510 520 530 540 550
YEPSVIAKYA IHLAKAYNKY YANTKILVED DELNARLALV KSVSIVLKEA
560
LRLLGVKAPD EM
Length:562
Mass (Da):62,910
Last modified:June 1, 2003 - v1
Checksum:iD3B1F7AF5B6682C2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL935263 Genomic DNA. Translation: CCC78734.1.
RefSeqiYP_004889248.1. NC_004567.2.

Genome annotation databases

EnsemblBacteriaiCCC78734; CCC78734; lp_1391.
GeneIDi1062530.
KEGGilpl:lp_1391.
PATRICi22249045. VBILacPla27411_1165.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL935263 Genomic DNA. Translation: CCC78734.1 .
RefSeqi YP_004889248.1. NC_004567.2.

3D structure databases

ProteinModelPortali Q88X53.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 220668.lp_1391.

Proteomic databases

PRIDEi Q88X53.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCC78734 ; CCC78734 ; lp_1391 .
GeneIDi 1062530.
KEGGi lpl:lp_1391.
PATRICi 22249045. VBILacPla27411_1165.

Phylogenomic databases

eggNOGi COG0018.
HOGENOMi HOG000247211.
KOi K01887.
OMAi YVKFHDE.

Enzyme and pathway databases

BioCyci LPLA220668-WGS:GSPK-1196-MONOMER.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-793 / NCIMB 8826 / WCFS1.

Entry informationi

Entry nameiSYR_LACPL
AccessioniPrimary (citable) accession number: Q88X53
Secondary accession number(s): F9UNE5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2003
Last sequence update: June 1, 2003
Last modified: October 29, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3