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Protein
Submitted name:

Uncharacterized protein

Gene

PP_0894

Organism
Pseudomonas putida (strain KT2440)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-926-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:PP_0894Imported
OrganismiPseudomonas putida (strain KT2440)Imported
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000556 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_0894.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3F7XX-ray1.24A1-132[»]
ProteinModelPortaliQ88PF6.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ88PF6.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 118112Cyclase_SnoaL-like_domInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG41090NR. Bacteria.
ENOG4111NRT. LUCA.
HOGENOMiHOG000142382.
OMAiRVTTYYN.
OrthoDBiEOG6D8BBT.

Family and domain databases

Gene3Di3.10.450.50. 1 hit.
InterProiIPR011721. CHP02096.
IPR009959. Cyclase_SnoaL-like_dom.
IPR032710. NTF2-like_dom.
[Graphical view]
PfamiPF12680. SnoaL_2. 1 hit.
[Graphical view]
SUPFAMiSSF54427. SSF54427. 1 hit.
TIGRFAMsiTIGR02096. TIGR02096. 1 hit.

Sequencei

Sequence statusi: Complete.

Q88PF6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTATELVNAY YAAFNAGDMP AFLALLSEDV IHDINQGERQ MGKARFAAFM
60 70 80 90 100
EKMNRCYRER LADIVVMQNA DGSRAAAEFT VHGQYLADDE GLPTANGQTY
110 120 130
VLPAGAFFYI HCGKIARVTN YYNLNDWVEQ VA
Length:132
Mass (Da):14,727
Last modified:June 1, 2003 - v1
Checksum:iDA5A76800EAF335D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN66519.1.
RefSeqiNP_743055.1. NC_002947.4.
WP_010952100.1. NC_002947.4.

Genome annotation databases

EnsemblBacteriaiAAN66519; AAN66519; PP_0894.
GeneIDi1044782.
KEGGippu:PP_0894.
PATRICi19939938. VBIPsePut30601_0955.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN66519.1.
RefSeqiNP_743055.1. NC_002947.4.
WP_010952100.1. NC_002947.4.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3F7XX-ray1.24A1-132[»]
ProteinModelPortaliQ88PF6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi160488.PP_0894.

Protocols and materials databases

DNASUi1044782.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN66519; AAN66519; PP_0894.
GeneIDi1044782.
KEGGippu:PP_0894.
PATRICi19939938. VBIPsePut30601_0955.

Phylogenomic databases

eggNOGiENOG41090NR. Bacteria.
ENOG4111NRT. LUCA.
HOGENOMiHOG000142382.
OMAiRVTTYYN.
OrthoDBiEOG6D8BBT.

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-926-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ88PF6.

Family and domain databases

Gene3Di3.10.450.50. 1 hit.
InterProiIPR011721. CHP02096.
IPR009959. Cyclase_SnoaL-like_dom.
IPR032710. NTF2-like_dom.
[Graphical view]
PfamiPF12680. SnoaL_2. 1 hit.
[Graphical view]
SUPFAMiSSF54427. SSF54427. 1 hit.
TIGRFAMsiTIGR02096. TIGR02096. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KT2440Imported.
  2. "Crystal structure of Putative polyketide cyclase. (NP_743055.1) from PSEUDOMONAS PUTIDA KT2440 at 1.24 A resolution."
    Joint Center for Structural Genomics (JCSG)
    Submitted (NOV-2008) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.24 ANGSTROMS).

Entry informationi

Entry nameiQ88PF6_PSEPK
AccessioniPrimary (citable) accession number: Q88PF6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: May 11, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.