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Q88PD0 (Q88PD0_PSEPK) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:xenB EMBL AAN66545.1
Ordered Locus Names:PP_0920 EMBL AAN66545.1
OrganismPseudomonas putida (strain KT2440) [Complete proteome] [HAMAP] EMBL AAN66545.1
Taxonomic identifier160488 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length349 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding23 – 253FMN PDB 4AB4 PDB 4AEO
Nucleotide binding285 – 2873FMN PDB 4AB4 PDB 4AEO
Nucleotide binding308 – 3092FMN PDB 4AB4 PDB 4AEO

Sites

Binding site561FMN; via amide nitrogen PDB 4AB4 PDB 4AEO
Binding site891Sulfate 1 PDB 4AB4 PDB 4AEO
Binding site981FMN PDB 4AB4 PDB 4AEO
Binding site1731FMN PDB 4AB4 PDB 4AEO
Binding site1941Sulfate 2 PDB 4AB4

Sequences

Sequence LengthMass (Da)Tools
Q88PD0 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: CF518A4FD351D941

FASTA34937,806
        10         20         30         40         50         60 
MTTLFDPIKL GDLQLPNRII MAPLTRCRAD EGRVPNALMA EYYVQRASAG LILSEATSVS 

        70         80         90        100        110        120 
PMGVGYPDTP GIWNDEQVRG WNNVTKAVHA AGGRIFLQLW HVGRISHPSY LNGELPVAPS 

       130        140        150        160        170        180 
AIQPKGHVSL VRPLSDYPTP RALETEEIND IVEAYRSGAE NAKAAGFDGV EIHGANGYLL 

       190        200        210        220        230        240 
DQFLQSSTNQ RTDRYGGSLE NRARLLLEVT DAAIEVWGAQ RVGVHLAPRA DAHDMGDADR 

       250        260        270        280        290        300 
AETFTYVARE LGKRGIAFIC SREREADDSI GPLIKEAFGG PYIVNERFDK ASANAALASG 

       310        320        330        340 
KADAVAFGVP FIANPDLPAR LAADAPLNEA HPETFYGKGP VGYIDYPRL 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440."
Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R., Nelson W., White O. expand/collapse author list , Peterson J., Khouri H., Hance I., Chris Lee P., Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Dusterhoft A., Tummler B., Fraser C.M.
Environ. Microbiol. 4:799-808(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KT2440 EMBL AAN66545.1.
[2]"Structural Determinants of Aromatic Ring Reduction in the Xenobiotic Reductase B from Pseudomonas Putida."
Carvalho A.L., Mukhopadhyay A., Bonifacio C., Romao M.J., Bursakov S., Kladova A., Ramos J.L., Van Dillewijn P.
Submitted (DEC-2011) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH FMN AND SULFATE.
[3]"Structural Determinants of Aromatic Ring Reduction in the Xenobiotic Reductase B from Pseudomonas Putida."
Carvalho A.L., Mukhopadhyay A., Bonifacio C., Romao M.J., Bursakov S., Kladova A., Ramos J.L., Van Dillewijn P.
Submitted (JAN-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH FMN AND SULFATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE015451 Genomic DNA. Translation: AAN66545.1.
RefSeqNP_743081.1. NC_002947.3.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4AB4X-ray1.50A/B1-349[»]
4AEOX-ray1.70A/B1-349[»]
ProteinModelPortalQ88PD0.
SMRQ88PD0. Positions 2-348.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING160488.PP_0920.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAN66545; AAN66545; PP_0920.
GeneID1044822.
KEGGppu:PP_0920.
PATRIC19939988. VBIPsePut30601_0980.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1902.
HOGENOMHOG000116231.
OMAPYIVNER.
OrthoDBEOG6XWTZX.
ProtClustDBCLSK2299205.

Enzyme and pathway databases

BioCycPPUT160488:GIXO-952-MONOMER.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
InterProIPR013785. Aldolase_TIM.
IPR001155. OxRdtase_FMN_N.
[Graphical view]
PfamPF00724. Oxidored_FMN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ88PD0_PSEPK
AccessionPrimary (citable) accession number: Q88PD0
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: April 16, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)