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Q88PD0

- Q88PD0_PSEPK

UniProt

Q88PD0 - Q88PD0_PSEPK

Protein
Submitted name:

Xenobiotic reductase B

Gene

xenB

Organism
Pseudomonas putida (strain KT2440)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei56 – 561FMN; via amide nitrogenImported
    Binding sitei98 – 981FMNImported
    Binding sitei173 – 1731FMNImported

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi23 – 253FMNImported
    Nucleotide bindingi285 – 2873FMNImported
    Nucleotide bindingi308 – 3092FMNImported

    GO - Molecular functioni

    1. FMN binding Source: InterPro
    2. oxidoreductase activity Source: InterPro

    Keywords - Ligandi

    Flavoprotein, FMNImported, Nucleotide-bindingImported

    Enzyme and pathway databases

    BioCyciPPUT160488:GIXO-952-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Xenobiotic reductase BImported
    Gene namesi
    Name:xenBImported
    Ordered Locus Names:PP_0920Imported
    OrganismiPseudomonas putida (strain KT2440)Imported
    Taxonomic identifieri160488 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000000556: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi160488.PP_0920.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4AB4X-ray1.50A/B1-349[»]
    4AEOX-ray1.70A/B1-349[»]
    ProteinModelPortaliQ88PD0.
    SMRiQ88PD0. Positions 2-348.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1902.
    HOGENOMiHOG000116231.
    OMAiDPIRIGD.
    OrthoDBiEOG6XWTZX.

    Family and domain databases

    Gene3Di3.20.20.70. 1 hit.
    InterProiIPR013785. Aldolase_TIM.
    IPR001155. OxRdtase_FMN_N.
    [Graphical view]
    PfamiPF00724. Oxidored_FMN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q88PD0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTTLFDPIKL GDLQLPNRII MAPLTRCRAD EGRVPNALMA EYYVQRASAG    50
    LILSEATSVS PMGVGYPDTP GIWNDEQVRG WNNVTKAVHA AGGRIFLQLW 100
    HVGRISHPSY LNGELPVAPS AIQPKGHVSL VRPLSDYPTP RALETEEIND 150
    IVEAYRSGAE NAKAAGFDGV EIHGANGYLL DQFLQSSTNQ RTDRYGGSLE 200
    NRARLLLEVT DAAIEVWGAQ RVGVHLAPRA DAHDMGDADR AETFTYVARE 250
    LGKRGIAFIC SREREADDSI GPLIKEAFGG PYIVNERFDK ASANAALASG 300
    KADAVAFGVP FIANPDLPAR LAADAPLNEA HPETFYGKGP VGYIDYPRL 349
    Length:349
    Mass (Da):37,806
    Last modified:June 1, 2003 - v1
    Checksum:iCF518A4FD351D941
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE015451 Genomic DNA. Translation: AAN66545.1.
    RefSeqiNP_743081.1. NC_002947.3.
    WP_010952123.1. NC_002947.3.

    Genome annotation databases

    EnsemblBacteriaiAAN66545; AAN66545; PP_0920.
    GeneIDi1044822.
    KEGGippu:PP_0920.
    PATRICi19939988. VBIPsePut30601_0980.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE015451 Genomic DNA. Translation: AAN66545.1 .
    RefSeqi NP_743081.1. NC_002947.3.
    WP_010952123.1. NC_002947.3.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4AB4 X-ray 1.50 A/B 1-349 [» ]
    4AEO X-ray 1.70 A/B 1-349 [» ]
    ProteinModelPortali Q88PD0.
    SMRi Q88PD0. Positions 2-348.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 160488.PP_0920.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAN66545 ; AAN66545 ; PP_0920 .
    GeneIDi 1044822.
    KEGGi ppu:PP_0920.
    PATRICi 19939988. VBIPsePut30601_0980.

    Phylogenomic databases

    eggNOGi COG1902.
    HOGENOMi HOG000116231.
    OMAi DPIRIGD.
    OrthoDBi EOG6XWTZX.

    Enzyme and pathway databases

    BioCyci PPUT160488:GIXO-952-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.70. 1 hit.
    InterProi IPR013785. Aldolase_TIM.
    IPR001155. OxRdtase_FMN_N.
    [Graphical view ]
    Pfami PF00724. Oxidored_FMN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KT2440Imported.
    2. "Structural Determinants of Aromatic Ring Reduction in the Xenobiotic Reductase B from Pseudomonas Putida."
      Carvalho A.L., Mukhopadhyay A., Bonifacio C., Romao M.J., Bursakov S., Kladova A., Ramos J.L., Van Dillewijn P.
      Submitted (DEC-2011) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH FMN.
    3. "Structural Determinants of Aromatic Ring Reduction in the Xenobiotic Reductase B from Pseudomonas Putida."
      Carvalho A.L., Mukhopadhyay A., Bonifacio C., Romao M.J., Bursakov S., Kladova A., Ramos J.L., Van Dillewijn P.
      Submitted (JAN-2012) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH FMN.

    Entry informationi

    Entry nameiQ88PD0_PSEPK
    AccessioniPrimary (citable) accession number: Q88PD0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3