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Protein
Submitted name:

Xenobiotic reductase B

Gene

xenB

Organism
Pseudomonas putida (strain KT2440)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei56 – 561FMN; via amide nitrogenCombined sources
Binding sitei98 – 981FMNCombined sources
Binding sitei173 – 1731FMNCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi23 – 253FMNCombined sources
Nucleotide bindingi285 – 2873FMNCombined sources
Nucleotide bindingi308 – 3092FMNCombined sources

GO - Molecular functioni

  1. FMN binding Source: InterPro
  2. oxidoreductase activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Flavoprotein, FMNCombined sources, Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-952-MONOMER.
BRENDAi1.7.1.B1. 5092.

Names & Taxonomyi

Protein namesi
Submitted name:
Xenobiotic reductase BImported
Gene namesi
Name:xenBImported
Ordered Locus Names:PP_0920Imported
OrganismiPseudomonas putida (strain KT2440)Imported
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000556 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_0920.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4AB4X-ray1.50A/B1-349[»]
4AEOX-ray1.70A/B1-349[»]
ProteinModelPortaliQ88PD0.
SMRiQ88PD0. Positions 2-348.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1902.
HOGENOMiHOG000116231.
OMAiYIVNERF.
OrthoDBiEOG6XWTZX.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR001155. OxRdtase_FMN_N.
[Graphical view]
PfamiPF00724. Oxidored_FMN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q88PD0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTLFDPIKL GDLQLPNRII MAPLTRCRAD EGRVPNALMA EYYVQRASAG
60 70 80 90 100
LILSEATSVS PMGVGYPDTP GIWNDEQVRG WNNVTKAVHA AGGRIFLQLW
110 120 130 140 150
HVGRISHPSY LNGELPVAPS AIQPKGHVSL VRPLSDYPTP RALETEEIND
160 170 180 190 200
IVEAYRSGAE NAKAAGFDGV EIHGANGYLL DQFLQSSTNQ RTDRYGGSLE
210 220 230 240 250
NRARLLLEVT DAAIEVWGAQ RVGVHLAPRA DAHDMGDADR AETFTYVARE
260 270 280 290 300
LGKRGIAFIC SREREADDSI GPLIKEAFGG PYIVNERFDK ASANAALASG
310 320 330 340
KADAVAFGVP FIANPDLPAR LAADAPLNEA HPETFYGKGP VGYIDYPRL
Length:349
Mass (Da):37,806
Last modified:June 1, 2003 - v1
Checksum:iCF518A4FD351D941
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN66545.1.
RefSeqiNP_743081.1. NC_002947.3.
WP_010952123.1. NC_002947.3.

Genome annotation databases

EnsemblBacteriaiAAN66545; AAN66545; PP_0920.
GeneIDi1044822.
KEGGippu:PP_0920.
PATRICi19939988. VBIPsePut30601_0980.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN66545.1.
RefSeqiNP_743081.1. NC_002947.3.
WP_010952123.1. NC_002947.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4AB4X-ray1.50A/B1-349[»]
4AEOX-ray1.70A/B1-349[»]
ProteinModelPortaliQ88PD0.
SMRiQ88PD0. Positions 2-348.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi160488.PP_0920.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN66545; AAN66545; PP_0920.
GeneIDi1044822.
KEGGippu:PP_0920.
PATRICi19939988. VBIPsePut30601_0980.

Phylogenomic databases

eggNOGiCOG1902.
HOGENOMiHOG000116231.
OMAiYIVNERF.
OrthoDBiEOG6XWTZX.

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-952-MONOMER.
BRENDAi1.7.1.B1. 5092.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR001155. OxRdtase_FMN_N.
[Graphical view]
PfamiPF00724. Oxidored_FMN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KT2440Imported.
  2. "Structural Determinants of Aromatic Ring Reduction in the Xenobiotic Reductase B from Pseudomonas Putida."
    Carvalho A.L., Mukhopadhyay A., Bonifacio C., Romao M.J., Bursakov S., Kladova A., Ramos J.L., Van Dillewijn P.
    Submitted (DEC-2011) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) IN COMPLEX WITH FMN.
  3. "Structural Determinants of Aromatic Ring Reduction in the Xenobiotic Reductase B from Pseudomonas Putida."
    Carvalho A.L., Mukhopadhyay A., Bonifacio C., Romao M.J., Bursakov S., Kladova A., Ramos J.L., Van Dillewijn P.
    Submitted (JAN-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH FMN.

Entry informationi

Entry nameiQ88PD0_PSEPK
AccessioniPrimary (citable) accession number: Q88PD0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: April 29, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.