Q88P67 (Q88P67_PSEPK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Aminomethyltransferase RuleBase RU003981
EC=2.1.2.10 RuleBase RU003981

Gene names

Name:	gcvT-1 EMBL AAN66611.1
Ordered Locus Names:	PP0986
ORF Names:	PP_0986 EMBL AAN66611.1

Organism

Pseudomonas putida (strain KT2440) [Complete proteome] [HAMAP]

Taxonomic identifier

160488 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	373 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The glycine cleavage system catalyzes the degradation of glycine By similarity. RuleBase RU003981
Catalytic activity	[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. SAAS SAAS006223 RuleBase RU003981
Subunit structure	The glycine cleavage system is composed of four proteins: P, T, L and H By similarity. RuleBase RU003981
Sequence similarities	Belongs to the GcvT family. RuleBase RU003980

Ontologies

Keywords
Molecular function	Aminotransferase SAAS SAAS006223 RuleBase RU003981 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycine catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminomethyltransferase activity Inferred from electronic annotation. Source: EC transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q88P67 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: F5482D136B19943C	FASTA	373	40,320
	10 20 30 40 50 60 MSETLLKTPL HALHLELGAR MVPFAGYDMP VQYPLGVLKE HLHTREQAGL FDVSHMGQII 70 80 90 100 110 120 LRGADAAKAL ESLVPVDIID LPVGMQRYAM FTNEQGGILD DLMVANLGED TLFLVVNAAC 130 140 150 160 170 180 KEQDLAHLQT HIGSRCEVQP LFEERALLAL QGPAAVKVLE RLAPEVAGMT FMQFRRVKLL 190 200 210 220 230 240 GVDCFVSRSG YTGEDGYEIS VPVNAADALA RRLMAEPEVQ PIGLGARDSL RLEAGLCLYG 250 260 270 280 290 300 HDMNSETTPI EASLLWAISK VRRADGARAA GFPGAEAIFA HVRDGVARKR VGLLPQERTP 310 320 330 340 350 360 VREGADIVDA NDKPVGKVCS GGFGPTLAAP VAMGYIDSEH AALDTALFAV VRGKKVALKV 370 SKMPFVTPRY YRG

References

[1]

"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440." Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R., Nelson W., White O. , Peterson J., Khouri H., Hance I., Chris Lee P., Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Dusterhoft A., Tummler B., Fraser C.M. Environ. Microbiol. 4:799-808(2002) [PubMed: 12534463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE015451 Genomic DNA. Translation: AAN66611.1.
RefSeq	NP_743147.1. NC_002947.3.
3D structure databases
ProteinModelPortal	Q88P67.
ModBase	Search...
Protein-protein interaction databases
STRING	Q88P67.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1044911.
GenomeReviews	Gene locus PP0986 in contig AE015451_GR.
KEGG	ppu:PP_0986.
NMPDR	fig|160488.1.peg.977.
PATRIC	19940120. VBIPsePut30601_1046.
TIGR	PP0986.
Phylogenomic databases
eggNOG	COG0404.
HOGENOM	HBG299834.
OMA	MPVQYPL.
PhylomeDB	Q88P67.
ProtClustDB	CLSK867274.
Enzyme and pathway databases
BioCyc	PPUT160488:PP_0986-MONOMER.
Family and domain databases
InterPro	IPR013977. GCV_T_C. IPR006222. GCV_T_N. IPR006223. GcvT. [Graphical view]
KO	K00605.
PANTHER	PTHR13847:SF5. PTHR13847:SF5. 1 hit.
Pfam	PF01571. GCV_T. 1 hit. PF08669. GCV_T_C. 1 hit. [Graphical view]
PIRSF	PIRSF006487. GcvT. 1 hit.
TIGRFAMs	TIGR00528. GcvT. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q88P67_PSEPK

Accession

Primary (citable) accession number: Q88P67

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)